RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 PHF14O94880 888 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 UBE2HP62256 183 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 CHRNDQ07001 517 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 ERFEQ4G0M1 354 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 BSDC1Q9NW68 430 aaPredicted RBP12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 A0A1B0GUL6 1792 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 ZNF532Q9HCE3 1301 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 ALX1Q15699 326 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 TMEM63CQ9P1W3 806 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 ZNF213O14771 459 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 STK3Q13188 491 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 NCOA7Q8NI08 942 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 CNPY2Q9Y2B0 182 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
PHACTR4-204ENST00000493669 MCM5P33992 734 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 ZPR1O75312 459 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 SCRN1Q12765 414 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 MEX3CQ5U5Q3 659 aaKnown RBP12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 TBC1D9BQ66K14 1250 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 MB21D2Q8IYB1 491 aaPredicted RBP12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 TCHHQ07283 1943 aa12.74□□□□□ -0.37
PHACTR4-204ENST00000493669 KRT85P78386 507 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 RALYLQ86SE5 291 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 SETDB2Q96T68 719 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 ELP1O95163 1332 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 GNPATO15228 680 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 CERKQ8TCT0 537 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 STRBPQ96SI9 672 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 WWC3Q9ULE0 1092 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 ZBTB22O15209 634 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 GNAT2P19087 354 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 GTF2E1P29083 439 aaPredicted RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 LRRC2Q9BYS8 371 aa12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
PHACTR4-204ENST00000493669 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 C4BP0C0L5 1744 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 A0A0G2JLW4 131 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 LETM1O95202 739 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 DNM1Q05193 864 aaKnown RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 TRDNQ13061 729 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 FOXD4L6Q3SYB3 417 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 NAA16Q6N069 864 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 FOXD4L3Q6VB84 417 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 FAM184AQ8NB25 1140 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 AFF2P51816 1311 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 GADD45BO75293 160 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 PDIA3P30101 505 aaKnown RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 TPTE2Q6XPS3 522 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 NLRP3Q96P20 1036 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 SCAND2PQ9GZW5 306 aaPredicted RBP12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 SALL1Q9NSC2 1324 aa12.72□□□□□ -0.37
PHACTR4-204ENST00000493669 FIBPO43427 364 aa12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 PRC1O43663 620 aa12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 JAK2O60674 1132 aa12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
PHACTR4-204ENST00000493669 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 SEMA3EO15041 775 aa12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 DHX16O60231 1041 aaKnown RBP12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 ADRA2BP18089 450 aa12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 BCAMP50895 628 aa12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 HAND2P61296 217 aa12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 CCDC183Q5T5S1 534 aa12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 PDS5AQ29RF7 1337 aaKnown RBP12.71□□□□□ -0.38
PHACTR4-204ENST00000493669 PTPDC1A2A3K4 754 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 KCNQ4P56696 695 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 COL4A1P02462 1669 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 CAVIN4Q5BKX8 364 aa12.7□□□□□ -0.38
PHACTR4-204ENST00000493669 TMED8Q6PL24 325 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms