RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CCDC39Q9UFE4 941 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 LEMD3Q9Y2U8 911 aa7.65□□□□□ -1.18
CLIP4-212ENST00000493551 BIVM-ERCC5R4GMW8 1640 aa7.64□□□□□ -1.19
CLIP4-212ENST00000493551 FAM177BA6PVY3 158 aa7.64□□□□□ -1.19
CLIP4-212ENST00000493551 ADAM11O75078 769 aa7.64□□□□□ -1.19
CLIP4-212ENST00000493551 PRNPP04156 253 aa7.64□□□□□ -1.19
CLIP4-212ENST00000493551 FOSL1P15407 271 aa7.64□□□□□ -1.19
CLIP4-212ENST00000493551 JUNBP17275 347 aaPredicted RBP7.64□□□□□ -1.19
CLIP4-212ENST00000493551 TRIP4Q15650 581 aaPredicted RBP7.64□□□□□ -1.19
CLIP4-212ENST00000493551 SEC31BQ9NQW1 1179 aa7.64□□□□□ -1.19
CLIP4-212ENST00000493551 DDX3YO15523 660 aaKnown RBP7.63□□□□□ -1.19
CLIP4-212ENST00000493551 ITGB5P18084 799 aa7.63□□□□□ -1.19
CLIP4-212ENST00000493551 EPHA1P21709 976 aa7.63□□□□□ -1.19
CLIP4-212ENST00000493551 COL13A1Q5TAT6 717 aaPredicted RBP7.63□□□□□ -1.19
CLIP4-212ENST00000493551 FDX2Q6P4F2 183 aa7.63□□□□□ -1.19
CLIP4-212ENST00000493551 VSIG10LQ86VR7 867 aa7.63□□□□□ -1.19
CLIP4-212ENST00000493551 COL26A1Q96A83 441 aa7.63□□□□□ -1.19
CLIP4-212ENST00000493551 UBTFP17480 764 aaKnown RBP7.62□□□□□ -1.19
CLIP4-212ENST00000493551 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
CLIP4-212ENST00000493551 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
CLIP4-212ENST00000493551 RASSF4Q9H2L5 321 aa7.62□□□□□ -1.19
CLIP4-212ENST00000493551 GAS2O43903 313 aaKnown RBP7.61□□□□□ -1.19
CLIP4-212ENST00000493551 PTPRAP18433 802 aa7.61□□□□□ -1.19
CLIP4-212ENST00000493551 MAP4P27816 1152 aaKnown RBP7.61□□□□□ -1.19
CLIP4-212ENST00000493551 KANK4Q5T7N3 995 aaPredicted RBP7.61□□□□□ -1.19
CLIP4-212ENST00000493551 TP53INP2Q8IXH6 220 aa7.61□□□□□ -1.19
CLIP4-212ENST00000493551 WNT8BQ93098 351 aa7.61□□□□□ -1.19
CLIP4-212ENST00000493551 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
CLIP4-212ENST00000493551 SH2B1Q9NRF2 756 aaPredicted RBP7.61□□□□□ -1.19
CLIP4-212ENST00000493551 PTPRGP23470 1445 aa7.61□□□□□ -1.19
CLIP4-212ENST00000493551 ASXL2Q76L83 1435 aa7.61□□□□□ -1.19
CLIP4-212ENST00000493551 UBAP1LF5GYI3 381 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 KIF4AO95239 1232 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 F13BP05160 661 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 SCNN1AP37088 669 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 COX20Q5RI15 118 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 ETFBKMTQ8IXQ9 262 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 RUSC1Q9BVN2 902 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 PBX4Q9BYU1 374 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 OSGEPQ9NPF4 335 aa7.6□□□□□ -1.19
CLIP4-212ENST00000493551 PPRC1Q5VV67 1664 aaKnown RBP7.6□□□□□ -1.19
CLIP4-212ENST00000493551 H3BRJ5 948 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 CABP4P57796 275 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 PIP4K2BP78356 416 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 TTC39BQ5VTQ0 682 aaPredicted RBP7.59□□□□□ -1.19
CLIP4-212ENST00000493551 NFXL1Q6ZNB6 911 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 FBXL6Q8N531 539 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 GLMNQ92990 594 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 ARXQ96QS3 562 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 METTL22Q9BUU2 404 aaPredicted RBP7.59□□□□□ -1.19
CLIP4-212ENST00000493551 ADAM19Q9H013 955 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 FAM13BQ9NYF5 915 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 CUL7Q14999 1698 aa7.59□□□□□ -1.19
CLIP4-212ENST00000493551 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
CLIP4-212ENST00000493551 PIK3R5Q8WYR1 880 aa7.58□□□□□ -1.2
CLIP4-212ENST00000493551 KIAA0586Q9BVV6 1533 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 NLRP12P59046 1061 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 FLIIQ13045 1269 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 AGBL5Q8NDL9 886 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 VRTNQ9H8Y1 702 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
CLIP4-212ENST00000493551 FNDC3AQ9Y2H6 1198 aaKnown RBP7.57□□□□□ -1.2
CLIP4-212ENST00000493551 ABCC2Q92887 1545 aa7.57□□□□□ -1.2
CLIP4-212ENST00000493551 MEGF11A6BM72 1044 aa7.56□□□□□ -1.2
CLIP4-212ENST00000493551 A6NJR5 290 aa7.56□□□□□ -1.2
CLIP4-212ENST00000493551 RXRBP28702 533 aa7.56□□□□□ -1.2
CLIP4-212ENST00000493551 NCAPG2Q86XI2 1143 aa7.56□□□□□ -1.2
CLIP4-212ENST00000493551 ZMYND15Q9H091 742 aa7.56□□□□□ -1.2
CLIP4-212ENST00000493551 ARID3CA6NKF2 412 aa7.55□□□□□ -1.2
CLIP4-212ENST00000493551 FKBP5Q13451 457 aaPredicted RBP7.55□□□□□ -1.2
CLIP4-212ENST00000493551 COL19A1Q14993 1142 aa7.55□□□□□ -1.2
CLIP4-212ENST00000493551 CEP120Q8N960 986 aa7.55□□□□□ -1.2
CLIP4-212ENST00000493551 POP1Q99575 1024 aaKnown RBP7.55□□□□□ -1.2
CLIP4-212ENST00000493551 PPP1R12CQ9BZL4 782 aa7.55□□□□□ -1.2
CLIP4-212ENST00000493551 TNIKQ9UKE5 1360 aa7.55□□□□□ -1.2
CLIP4-212ENST00000493551 CYP26A1O43174 497 aa7.54□□□□□ -1.2
CLIP4-212ENST00000493551 ABI2Q9NYB9 513 aaPredicted RBP7.54□□□□□ -1.2
CLIP4-212ENST00000493551 PLB1Q6P1J6 1458 aa7.54□□□□□ -1.2
CLIP4-212ENST00000493551 CARMIL2Q6F5E8 1435 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 EPRSP07814 1512 aaKnown RBP7.53□□□□□ -1.2
CLIP4-212ENST00000493551 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 FAM26DQ5JW98 314 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 PAOXQ6QHF9 649 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 FBXO41Q8TF61 875 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 KRTAP4-11Q9BYQ6 195 aa7.53□□□□□ -1.2
CLIP4-212ENST00000493551 KIF21BO75037 1637 aa7.52□□□□□ -1.2
CLIP4-212ENST00000493551 GLI2P10070 1586 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 ARL4DP49703 201 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 C16orf46Q6P387 395 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 SHISA5Q8N114 240 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 FAM200AQ8TCP9 573 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 SLC7A3Q8WY07 619 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 ZCCHC11Q5TAX3 1644 aaKnown RBP7.52□□□□□ -1.21
CLIP4-212ENST00000493551 MAP3K4Q9Y6R4 1608 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 KIF27Q86VH2 1401 aa7.52□□□□□ -1.21
CLIP4-212ENST00000493551 UACAQ9BZF9 1416 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms