RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FAM20CQ8IXL6 584 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 FAM83CQ9BQN1 747 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 KCNF1Q9H3M0 494 aa6.5□□□□□ -1.37
PTCD3-218ENST00000493430 FOXD3Q9UJU5 478 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-218ENST00000493430 MEGF11A6BM72 1044 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 FZD6O60353 706 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 ABL1P00519 1130 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 TGFB1P01137 390 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-218ENST00000493430 BEND4Q6ZU67 534 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 VN1R5Q7Z5H4 357 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 ASAP3Q8TDY4 903 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 DBNDD2Q9BQY9 259 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 C1orf115Q9H7X2 142 aa6.49□□□□□ -1.37
PTCD3-218ENST00000493430 CARNS1A5YM72 827 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 PREPP48147 710 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 NUTM2GQ5VZR2 741 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 HGSNATQ68CP4 663 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 INTS5Q6P9B9 1019 aaKnown RBP6.48□□□□□ -1.37
PTCD3-218ENST00000493430 ZDHHC13Q8IUH4 622 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 GJD3Q8N144 294 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 BHLHE41Q9C0J9 482 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-218ENST00000493430 ZFYVE28Q9HCC9 887 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 CCDC87Q9NVE4 849 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 AMOTL2Q9Y2J4 779 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
PTCD3-218ENST00000493430 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-218ENST00000493430 MED26O95402 600 aa6.47□□□□□ -1.37
PTCD3-218ENST00000493430 GRIK1P39086 918 aa6.47□□□□□ -1.37
PTCD3-218ENST00000493430 SOX17Q9H6I2 414 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-218ENST00000493430 KIAA1324LA8MWY0 1029 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-218ENST00000493430 GAS2O43903 313 aaKnown RBP6.46□□□□□ -1.38
PTCD3-218ENST00000493430 ZNF211Q13398 564 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-218ENST00000493430 PEAR1Q5VY43 1037 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-218ENST00000493430 C12orf50Q8NA57 414 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-218ENST00000493430 USP26Q9BXU7 913 aa6.46□□□□□ -1.38
PTCD3-218ENST00000493430 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
PTCD3-218ENST00000493430 CYP4F12Q9HCS2 524 aa6.46□□□□□ -1.38
PTCD3-218ENST00000493430 LATS2Q9NRM7 1088 aa6.46□□□□□ -1.38
PTCD3-218ENST00000493430 ESRRAP11474 423 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-218ENST00000493430 B4GALNT3Q6L9W6 998 aa6.45□□□□□ -1.38
PTCD3-218ENST00000493430 SMG8Q8ND04 991 aaKnown RBP6.45□□□□□ -1.38
PTCD3-218ENST00000493430 TMPRSS13Q9BYE2 586 aa6.45□□□□□ -1.38
PTCD3-218ENST00000493430 SUGCTQ9HAC7 445 aa6.45□□□□□ -1.38
PTCD3-218ENST00000493430 LOC100289279A0A1B0GTE1 492 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 PRR19A6NJB7 356 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-218ENST00000493430 MAP4P27816 1152 aaKnown RBP6.44□□□□□ -1.38
PTCD3-218ENST00000493430 GSTM4Q03013 218 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 EXOSC6Q5RKV6 272 aaKnown RBP6.44□□□□□ -1.38
PTCD3-218ENST00000493430 C14orf37Q86TY3 774 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 EGFL7Q9UHF1 273 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 USTQ9Y2C2 406 aa6.44□□□□□ -1.38
PTCD3-218ENST00000493430 WDR64B1ANS9 1081 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 ICMTO60725 284 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 POLR3DP05423 398 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-218ENST00000493430 NEFLP07196 543 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 RXRBP28702 533 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 SGO2Q562F6 1265 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 GIMAP7Q8NHV1 300 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 BRPF3Q9ULD4 1205 aa6.43□□□□□ -1.38
PTCD3-218ENST00000493430 A0A096LPE4 126 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 A0A1W2PPZ6 126 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 METTL12A8MUP2 240 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 TIAF1O95411 115 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 DLGAP3O95886 979 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 SPINK2P20155 84 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 USP11P51784 963 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 GP2P55259 537 aaKnown RBP6.42□□□□□ -1.38
PTCD3-218ENST00000493430 GALNT12Q8IXK2 581 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 MFSD14AQ96MC6 490 aa6.42□□□□□ -1.38
PTCD3-218ENST00000493430 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-218ENST00000493430 A0A1W2PP55 124 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 DRD2P14416 443 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 IRAK1P51617 712 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 PCDH1Q08174 1060 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 CCNJLQ8IV13 435 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 GLYCTKQ8IVS8 523 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-218ENST00000493430 LIN7BQ9HAP6 207 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 ATG3Q9NT62 314 aa6.41□□□□□ -1.38
PTCD3-218ENST00000493430 FAM95CA0A1B0GW59 222 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 H3BRB1 525 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 CYP11A1P05108 521 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 SOX4Q06945 474 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-218ENST00000493430 NFKBIBQ15653 356 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 ZNF423Q2M1K9 1284 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 PAOXQ6QHF9 649 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 TCF12Q99081 682 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 TUT1Q9H6E5 874 aaKnown RBP6.4□□□□□ -1.38
PTCD3-218ENST00000493430 ZFYVE1Q9HBF4 777 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 PIM2Q9P1W9 311 aa6.4□□□□□ -1.38
PTCD3-218ENST00000493430 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.38
PTCD3-218ENST00000493430 NDUFB5O43674 189 aa6.39□□□□□ -1.39
PTCD3-218ENST00000493430 WNT11O96014 354 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms