RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CASP7P55210 303 aa14.03□□□□□ -0.16
SNRNP200-207ENST00000493271 PRKG1Q13976 671 aa14.03□□□□□ -0.16
SNRNP200-207ENST00000493271 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
SNRNP200-207ENST00000493271 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
SNRNP200-207ENST00000493271 TRIM17Q9Y577 477 aa14.03□□□□□ -0.16
SNRNP200-207ENST00000493271 IL16Q14005 1332 aa14.03□□□□□ -0.16
SNRNP200-207ENST00000493271 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 SPDYE6P0CI01 402 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 IL1R1P14778 569 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 KLRK1P26718 216 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 IREB2P48200 963 aaKnown RBP14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 FLIIQ13045 1269 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 TNFAIP1Q13829 316 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 WNK4Q96J92 1243 aa14.02□□□□□ -0.17
SNRNP200-207ENST00000493271 ECM29Q5VYK3 1845 aa14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 IRS2Q9Y4H2 1338 aa14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 FKBP5Q13451 457 aaPredicted RBP14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 ARHGEF6Q15052 776 aa14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 OTOP1Q7RTM1 612 aa14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 ANKRD13AQ8IZ07 590 aa14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 TSR2Q969E8 191 aaKnown RBP14.01□□□□□ -0.17
SNRNP200-207ENST00000493271 CFAP100Q494V2 611 aa14□□□□□ -0.17
SNRNP200-207ENST00000493271 G2E3Q7L622 706 aa14□□□□□ -0.17
SNRNP200-207ENST00000493271 CERS5Q8N5B7 392 aa14□□□□□ -0.17
SNRNP200-207ENST00000493271 R3HDMLQ9H3Y0 253 aa14□□□□□ -0.17
SNRNP200-207ENST00000493271 PTPN22Q9Y2R2 807 aa14□□□□□ -0.17
SNRNP200-207ENST00000493271 SSC5DA1L4H1 1573 aa14□□□□□ -0.17
SNRNP200-207ENST00000493271 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
SNRNP200-207ENST00000493271 IGF2BP3O00425 579 aaKnown RBP eCLIP13.99□□□□□ -0.17
SNRNP200-207ENST00000493271 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
SNRNP200-207ENST00000493271 CACNA1FO60840 1977 aa13.99□□□□□ -0.17
SNRNP200-207ENST00000493271 RBBP6Q7Z6E9 1792 aaKnown RBP13.99□□□□□ -0.17
SNRNP200-207ENST00000493271 ARMC5Q96C12 935 aa13.98□□□□□ -0.17
SNRNP200-207ENST00000493271 CLMNQ96JQ2 1002 aa13.98□□□□□ -0.17
SNRNP200-207ENST00000493271 PRMT6Q96LA8 375 aaPredicted RBP13.98□□□□□ -0.17
SNRNP200-207ENST00000493271 EFCC1Q9HA90 598 aa13.98□□□□□ -0.17
SNRNP200-207ENST00000493271 VEZTQ9HBM0 779 aa13.98□□□□□ -0.17
SNRNP200-207ENST00000493271 HTTP42858 3142 aa13.98□□□□□ -0.17
SNRNP200-207ENST00000493271 FAM205AQ6ZU69 1335 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 CLRN2A0PK11 232 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 TAF5LO75529 589 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 SP3Q02447 781 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 CRHR2Q13324 411 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 RASA3Q14644 834 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 CCDC57Q2TAC2 916 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 SERPINA10Q9UK55 444 aa13.97□□□□□ -0.17
SNRNP200-207ENST00000493271 F8W031 263 aaPredicted RBP13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 WDHD1O75717 1129 aaPredicted RBP13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 TNNI2P48788 182 aa13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 RBM5P52756 815 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 FOXO4P98177 505 aa13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 NBPF12Q5TAG4 269 aaPredicted RBP13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 LDHAL6AQ6ZMR3 332 aa13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 FZD1Q9UP38 647 aa13.96□□□□□ -0.17
SNRNP200-207ENST00000493271 A0A1B0GUL6 1792 aa13.96□□□□□ -0.18
SNRNP200-207ENST00000493271 UBE4AQ14139 1066 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 NBPF11Q86T75 865 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 HELBQ8NG08 1087 aaPredicted RBP13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 CD99L2Q8TCZ2 262 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 OPTNQ96CV9 577 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 CNNM1Q9NRU3 951 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
SNRNP200-207ENST00000493271 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 SNAP23O00161 211 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 GTF2A2P52657 109 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 HABP4Q5JVS0 413 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 MFSD14BQ5SR56 506 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 BEND3Q5T5X7 828 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 TDRD7Q8NHU6 1098 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 ZFYVE28Q9HCC9 887 aa13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 ZCCHC17Q9NP64 241 aaKnown RBP13.94□□□□□ -0.18
SNRNP200-207ENST00000493271 FANCIQ9NVI1 1328 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 GRM8O00222 908 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 VAMP4O75379 141 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 HIBADHP31937 336 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 GJA5P36382 358 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 HOOK2Q96ED9 719 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 PTPN18Q99952 460 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 ZNF70Q9UC06 446 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 PCDHAC2Q9Y5I4 1007 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 CSADQ9Y600 493 aa13.93□□□□□ -0.18
SNRNP200-207ENST00000493271 GNRH1P01148 92 aa13.92□□□□□ -0.18
SNRNP200-207ENST00000493271 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-207ENST00000493271 TBC1D22AQ8WUA7 517 aa13.92□□□□□ -0.18
SNRNP200-207ENST00000493271 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
SNRNP200-207ENST00000493271 ELP3Q9H9T3 547 aa13.92□□□□□ -0.18
SNRNP200-207ENST00000493271 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
SNRNP200-207ENST00000493271 MKI67P46013 3256 aaKnown RBP13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 ARAP2Q8WZ64 1704 aa13.91□□□□□ -0.18
SNRNP200-207ENST00000493271 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms