RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 SPEF2Q9C093 1822 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 ADD1P35611 737 aaKnown RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 IMMTQ16891 758 aaKnown RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 DNTTIP2Q5QJE6 756 aaKnown RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 OTUD7BQ6GQQ9 843 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 INTS5Q6P9B9 1019 aaKnown RBP15.12■□□□□ 0.01
PRAME-213ENST00000492657 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 NUP62CLQ9H1M0 184 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 SEC31BQ9NQW1 1179 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 SLIT2O94813 1529 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 NR1I2O75469 434 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 CCDC102BQ68D86 513 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 CTNNA3Q9UI47 895 aa15.12■□□□□ 0.01
PRAME-213ENST00000492657 COL14A1Q05707 1796 aaKnown RBP15.11■□□□□ 0.01
PRAME-213ENST00000492657 PRC1O43663 620 aa15.11■□□□□ 0.01
PRAME-213ENST00000492657 FDPSP14324 419 aaKnown RBP15.11■□□□□ 0.01
PRAME-213ENST00000492657 ANTXR2P58335 489 aa15.11■□□□□ 0.01
PRAME-213ENST00000492657 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
PRAME-213ENST00000492657 MYH3P11055 1940 aa15.11■□□□□ 0.01
PRAME-213ENST00000492657 ERVV-1B6SEH8 477 aa15.11■□□□□ 0.01
PRAME-213ENST00000492657 ADD2P35612 726 aa15.11■□□□□ 0.01
PRAME-213ENST00000492657 EIF5P55010 431 aaKnown RBP15.11■□□□□ 0.01
PRAME-213ENST00000492657 BICD2Q8TD16 824 aa15.11■□□□□ 0.01
PRAME-213ENST00000492657 KDM4AO75164 1064 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 ATP6V1AP38606 617 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 MAP3K11Q16584 847 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 MB21D2Q8IYB1 491 aaPredicted RBP15.1■□□□□ 0.01
PRAME-213ENST00000492657 ZNF274Q96GC6 653 aaPredicted RBP15.1■□□□□ 0.01
PRAME-213ENST00000492657 NBPF3Q9H094 633 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
PRAME-213ENST00000492657 MCM5P33992 734 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 CRKLP46109 303 aaKnown RBP15.1■□□□□ 0.01
PRAME-213ENST00000492657 DDB1Q16531 1140 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 MARCH10Q8NA82 808 aaPredicted RBP15.1■□□□□ 0.01
PRAME-213ENST00000492657 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.1■□□□□ 0.012e-9■□□□□ 9.9
PRAME-213ENST00000492657 ROBO1Q9Y6N7 1651 aa15.1■□□□□ 0.01
PRAME-213ENST00000492657 MYH7P12883 1935 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 ZNF213O14771 459 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 CCDC192P0DO97 292 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 ITPK1Q13572 414 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 TNMDQ9H2S6 317 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 ZSCAN16Q9H4T2 348 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 INCENPQ9NQS7 918 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 GJB4Q9NTQ9 266 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 ZNF532Q9HCE3 1301 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 SALL1Q9NSC2 1324 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 KLF18A0A0U1RQI7 1052 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 APPP05067 770 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 HMGN5P82970 282 aaKnown RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 TYRO3Q06418 890 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 NAA16Q6N069 864 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 ILDR1Q86SU0 546 aaPredicted RBP15.09■□□□□ 0.01
PRAME-213ENST00000492657 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.09■□□□□ 0.011e-17■□□□□ 9.1
PRAME-213ENST00000492657 CCDC87Q9NVE4 849 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 MRVI1Q9Y6F6 885 aa15.09■□□□□ 0.01
PRAME-213ENST00000492657 ANKRD36CQ5JPF3 1778 aa15.08■□□□□ 0.01
PRAME-213ENST00000492657 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0.01
PRAME-213ENST00000492657 IGSF3O75054 1194 aa15.08■□□□□ 0
PRAME-213ENST00000492657 PDE6AP16499 860 aa15.08■□□□□ 0
PRAME-213ENST00000492657 TBC1D10CQ8IV04 446 aa15.08■□□□□ 0
PRAME-213ENST00000492657 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
PRAME-213ENST00000492657 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
PRAME-213ENST00000492657 DOT1LQ8TEK3 1739 aa15.07■□□□□ 0
PRAME-213ENST00000492657 SPATA31A1Q5TZJ5 1347 aa15.07■□□□□ 0
PRAME-213ENST00000492657 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
PRAME-213ENST00000492657 CBX1P83916 185 aa15.07■□□□□ 0
PRAME-213ENST00000492657 CARMIL3Q8ND23 1372 aa15.07■□□□□ 0
PRAME-213ENST00000492657 LOC102724428A0A0B4J2F2 783 aa15.07■□□□□ 0
PRAME-213ENST00000492657 FGFR2P21802 821 aa15.07■□□□□ 0
PRAME-213ENST00000492657 SIK1P57059 783 aa15.07■□□□□ 0
PRAME-213ENST00000492657 PUM3Q15397 648 aaKnown RBP15.07■□□□□ 0
PRAME-213ENST00000492657 LUZP1Q86V48 1076 aa15.07■□□□□ 0
PRAME-213ENST00000492657 NCOA7Q8NI08 942 aa15.07■□□□□ 0
PRAME-213ENST00000492657 CLSTN2Q9H4D0 955 aa15.07■□□□□ 0
PRAME-213ENST00000492657 CFAP45Q9UL16 551 aa15.07■□□□□ 0
PRAME-213ENST00000492657 KCNQ2O43526 872 aa15.07■□□□□ 0
PRAME-213ENST00000492657 EVCP57679 992 aa15.07■□□□□ 0
PRAME-213ENST00000492657 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
PRAME-213ENST00000492657 RALYLQ86SE5 291 aaKnown RBP15.07■□□□□ 0
PRAME-213ENST00000492657 TTC12Q9H892 705 aaPredicted RBP15.07■□□□□ 0
PRAME-213ENST00000492657 SENP2Q9HC62 589 aa15.07■□□□□ 0
PRAME-213ENST00000492657 MYH14Q7Z406 1995 aaKnown RBP15.06■□□□□ 0
PRAME-213ENST00000492657 ABCC12Q96J65 1359 aa15.06■□□□□ 0
PRAME-213ENST00000492657 CAMTA2O94983 1202 aa15.06■□□□□ 0
PRAME-213ENST00000492657 RXRAP19793 462 aa15.06■□□□□ 0
PRAME-213ENST00000492657 ARID4AP29374 1257 aaPredicted RBP15.06■□□□□ 0
PRAME-213ENST00000492657 KCNQ4P56696 695 aa15.06■□□□□ 0
PRAME-213ENST00000492657 LPIN2Q92539 896 aa15.06■□□□□ 0
PRAME-213ENST00000492657 ZNF512BQ96KM6 892 aaPredicted RBP15.06■□□□□ 0
PRAME-213ENST00000492657 UTP14AQ9BVJ6 771 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms