RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 TTLL5Q6EMB2 1281 aa17.31■□□□□ 0.36
MMP11-212ENST00000492464 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
MMP11-212ENST00000492464 GPC2Q8N158 579 aa17.31■□□□□ 0.36
MMP11-212ENST00000492464 CCDC136Q96JN2 1154 aa17.31■□□□□ 0.36
MMP11-212ENST00000492464 KCNQ5Q9NR82 932 aa17.31■□□□□ 0.36
MMP11-212ENST00000492464 TLR7Q9NYK1 1049 aaKnown RBP17.31■□□□□ 0.36
MMP11-212ENST00000492464 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
MMP11-212ENST00000492464 GTF2IP78347 998 aa17.3■□□□□ 0.36
MMP11-212ENST00000492464 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
MMP11-212ENST00000492464 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
MMP11-212ENST00000492464 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
MMP11-212ENST00000492464 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
MMP11-212ENST00000492464 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
MMP11-212ENST00000492464 FAM205AQ6ZU69 1335 aa17.29■□□□□ 0.36
MMP11-212ENST00000492464 YY1P25490 414 aa17.29■□□□□ 0.36
MMP11-212ENST00000492464 ARID4AP29374 1257 aaPredicted RBP17.29■□□□□ 0.36
MMP11-212ENST00000492464 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
MMP11-212ENST00000492464 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
MMP11-212ENST00000492464 MYO3BQ8WXR4 1341 aa17.28■□□□□ 0.36
MMP11-212ENST00000492464 DDNO94850 711 aaPredicted RBP17.28■□□□□ 0.36
MMP11-212ENST00000492464 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
MMP11-212ENST00000492464 NUCB1Q02818 461 aa17.28■□□□□ 0.36
MMP11-212ENST00000492464 RSBN1LQ6PCB5 846 aaPredicted RBP17.28■□□□□ 0.36
MMP11-212ENST00000492464 CENPQQ7L2Z9 268 aaPredicted RBP17.28■□□□□ 0.36
MMP11-212ENST00000492464 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
MMP11-212ENST00000492464 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
MMP11-212ENST00000492464 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.36
MMP11-212ENST00000492464 ZBTB22O15209 634 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 RPS12P25398 132 aaKnown RBP17.27■□□□□ 0.36
MMP11-212ENST00000492464 RASGRF1Q13972 1273 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 DACT2Q5SW24 774 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 CHD1LQ86WJ1 897 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 ZNF512BQ96KM6 892 aaPredicted RBP17.27■□□□□ 0.36
MMP11-212ENST00000492464 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
MMP11-212ENST00000492464 LMOD1P29536 600 aaPredicted RBP17.26■□□□□ 0.35
MMP11-212ENST00000492464 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
MMP11-212ENST00000492464 FKBP1AP62942 108 aaKnown RBP17.26■□□□□ 0.35
MMP11-212ENST00000492464 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
MMP11-212ENST00000492464 SPATA5Q8NB90 893 aa17.26■□□□□ 0.35
MMP11-212ENST00000492464 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
MMP11-212ENST00000492464 ZNF526Q8TF50 670 aaPredicted RBP17.26■□□□□ 0.35
MMP11-212ENST00000492464 MCAMP43121 646 aa17.25■□□□□ 0.35
MMP11-212ENST00000492464 ZGPATQ8N5A5 531 aaKnown RBP17.25■□□□□ 0.35
MMP11-212ENST00000492464 L3MBTL3Q96JM7 780 aaPredicted RBP17.25■□□□□ 0.35
MMP11-212ENST00000492464 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
MMP11-212ENST00000492464 ZBTB12Q9Y330 459 aaPredicted RBP17.25■□□□□ 0.35
MMP11-212ENST00000492464 SCARF1Q14162 830 aa17.24■□□□□ 0.35
MMP11-212ENST00000492464 C16orf71Q8IYS4 520 aaPredicted RBP17.24■□□□□ 0.35
MMP11-212ENST00000492464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.24■□□□□ 0.35
MMP11-212ENST00000492464 DPF2Q92785 391 aa17.24■□□□□ 0.35
MMP11-212ENST00000492464 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
MMP11-212ENST00000492464 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
MMP11-212ENST00000492464 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 ATP5JP18859 108 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 MX1P20591 662 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 PI16Q6UXB8 463 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
MMP11-212ENST00000492464 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 H7C1D1 291 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 ERC2O15083 957 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 SCNN1DP51172 638 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 SPTY2D1Q68D10 685 aaPredicted RBP17.22■□□□□ 0.35
MMP11-212ENST00000492464 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 CERS5Q8N5B7 392 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 OTUD7AQ8TE49 926 aaPredicted RBP17.22■□□□□ 0.35
MMP11-212ENST00000492464 GMLQ99445 158 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 GPBP1L1Q9HC44 474 aaPredicted RBP17.22■□□□□ 0.35
MMP11-212ENST00000492464 CNOT7Q9UIV1 285 aaKnown RBP17.22■□□□□ 0.35
MMP11-212ENST00000492464 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 HDAC9Q9UKV0 1011 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 SUGT1Q9Y2Z0 365 aa17.22■□□□□ 0.35
MMP11-212ENST00000492464 MAST3O60307 1309 aa17.21■□□□□ 0.35
MMP11-212ENST00000492464 F8W031 263 aaPredicted RBP17.21■□□□□ 0.35
MMP11-212ENST00000492464 USP17L8P0C7I0 530 aa17.21■□□□□ 0.35
MMP11-212ENST00000492464 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
MMP11-212ENST00000492464 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
MMP11-212ENST00000492464 ABCF2Q9UG63 623 aa17.21■□□□□ 0.35
MMP11-212ENST00000492464 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.34
MMP11-212ENST00000492464 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
MMP11-212ENST00000492464 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
MMP11-212ENST00000492464 ZAP70P43403 619 aa17.2■□□□□ 0.34
MMP11-212ENST00000492464 MMP14P50281 582 aa17.2■□□□□ 0.34
MMP11-212ENST00000492464 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
MMP11-212ENST00000492464 BOLA2Q9H3K6 86 aa17.2■□□□□ 0.34
MMP11-212ENST00000492464 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
MMP11-212ENST00000492464 NMRK2Q9NPI5 230 aa17.2■□□□□ 0.34
MMP11-212ENST00000492464 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
MMP11-212ENST00000492464 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
MMP11-212ENST00000492464 EPHX2P34913 555 aa17.19■□□□□ 0.34
MMP11-212ENST00000492464 EPS15P42566 896 aa17.19■□□□□ 0.34
MMP11-212ENST00000492464 PDE1AP54750 535 aa17.19■□□□□ 0.34
MMP11-212ENST00000492464 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
MMP11-212ENST00000492464 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
MMP11-212ENST00000492464 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms