RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 A0A1B0GUL7 405 aa18.81■□□□□ 0.6
SS18L1-204ENST00000491916 ZBTB22O15209 634 aa18.81■□□□□ 0.6
SS18L1-204ENST00000491916 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
SS18L1-204ENST00000491916 PHKA1P46020 1223 aa18.81■□□□□ 0.6
SS18L1-204ENST00000491916 TBC1D10BQ4KMP7 808 aaPredicted RBP18.81■□□□□ 0.6
SS18L1-204ENST00000491916 CAVIN4Q5BKX8 364 aa18.81■□□□□ 0.6
SS18L1-204ENST00000491916 MYO3BQ8WXR4 1341 aa18.8■□□□□ 0.6
SS18L1-204ENST00000491916 GRIK5Q16478 980 aa18.8■□□□□ 0.6
SS18L1-204ENST00000491916 MAP1SQ66K74 1059 aaPredicted RBP18.8■□□□□ 0.6
SS18L1-204ENST00000491916 FBXW7Q969H0 707 aa18.8■□□□□ 0.6
SS18L1-204ENST00000491916 CRBNQ96SW2 442 aa18.8■□□□□ 0.6
SS18L1-204ENST00000491916 CHMP4BQ9H444 224 aaKnown RBP18.8■□□□□ 0.6
SS18L1-204ENST00000491916 ASTN2O75129 1339 aaPredicted RBP18.79■□□□□ 0.6
SS18L1-204ENST00000491916 PASKQ96RG2 1323 aa18.79■□□□□ 0.6
SS18L1-204ENST00000491916 POLR2AP24928 1970 aaKnown RBP18.79■□□□□ 0.6
SS18L1-204ENST00000491916 XAGE2Q96GT9 111 aa18.79■□□□□ 0.6
SS18L1-204ENST00000491916 ZBED3Q96IU2 234 aaPredicted RBP18.79■□□□□ 0.6
SS18L1-204ENST00000491916 GPR108Q9NPR9 543 aa18.79■□□□□ 0.6
SS18L1-204ENST00000491916 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
SS18L1-204ENST00000491916 AKAP2Q9Y2D5 859 aa18.79■□□□□ 0.6
SS18L1-204ENST00000491916 HSPA6P17066 643 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 KIF4BQ2VIQ3 1234 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 RBM26Q5T8P6 1007 aaKnown RBP18.78■□□□□ 0.6
SS18L1-204ENST00000491916 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 VPS37DQ86XT2 251 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 KIAA0825Q8IV33 1275 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 CNTROBQ8N137 903 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 ZC3H15Q8WU90 426 aaKnown RBP18.78■□□□□ 0.6
SS18L1-204ENST00000491916 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 PCDHB15Q9Y5E8 787 aa18.78■□□□□ 0.6
SS18L1-204ENST00000491916 FMR1Q06787 632 aaKnown RBP eCLIP18.77■□□□□ 0.6
SS18L1-204ENST00000491916 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
SS18L1-204ENST00000491916 MFSD14BQ5SR56 506 aa18.77■□□□□ 0.6
SS18L1-204ENST00000491916 PCDHAC2Q9Y5I4 1007 aa18.77■□□□□ 0.6
SS18L1-204ENST00000491916 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
SS18L1-204ENST00000491916 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
SS18L1-204ENST00000491916 MYH13Q9UKX3 1938 aa18.75■□□□□ 0.59
SS18L1-204ENST00000491916 MMP14P50281 582 aa18.75■□□□□ 0.59
SS18L1-204ENST00000491916 CHAF1AQ13111 956 aaPredicted RBP18.75■□□□□ 0.59
SS18L1-204ENST00000491916 SCARF1Q14162 830 aa18.75■□□□□ 0.59
SS18L1-204ENST00000491916 NBPF9Q3BBW0 867 aa18.75■□□□□ 0.59
SS18L1-204ENST00000491916 EAF2Q96CJ1 260 aaPredicted RBP18.75■□□□□ 0.59
SS18L1-204ENST00000491916 NEUROD6Q96NK8 337 aa18.75■□□□□ 0.59
SS18L1-204ENST00000491916 AOX1Q06278 1338 aa18.74■□□□□ 0.59
SS18L1-204ENST00000491916 WNT10BO00744 389 aa18.74■□□□□ 0.59
SS18L1-204ENST00000491916 RASGRF1Q13972 1273 aa18.74■□□□□ 0.59
SS18L1-204ENST00000491916 DLK2Q6UY11 383 aa18.74■□□□□ 0.59
SS18L1-204ENST00000491916 MTMR14Q8NCE2 650 aa18.74■□□□□ 0.59
SS18L1-204ENST00000491916 DBNDD2Q9BQY9 259 aa18.74■□□□□ 0.59
SS18L1-204ENST00000491916 TLR7Q9NYK1 1049 aaKnown RBP18.74■□□□□ 0.59
SS18L1-204ENST00000491916 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
SS18L1-204ENST00000491916 TRAF5O00463 557 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 HMMRO75330 724 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 APLP1P51693 650 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 HTRA3P83110 453 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
SS18L1-204ENST00000491916 OGFOD1Q8N543 542 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 RHPN1Q8TCX5 695 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
SS18L1-204ENST00000491916 DBNLQ9UJU6 430 aaKnown RBP18.73■□□□□ 0.59
SS18L1-204ENST00000491916 PCNTO95613 3336 aa18.73■□□□□ 0.59
SS18L1-204ENST00000491916 SEMA3EO15041 775 aa18.72■□□□□ 0.59
SS18L1-204ENST00000491916 FRAT2O75474 233 aaPredicted RBP18.72■□□□□ 0.59
SS18L1-204ENST00000491916 ARID4AP29374 1257 aaPredicted RBP18.72■□□□□ 0.59
SS18L1-204ENST00000491916 TBC1D22AQ8WUA7 517 aa18.72■□□□□ 0.59
SS18L1-204ENST00000491916 GGA3Q9NZ52 723 aa18.72■□□□□ 0.59
SS18L1-204ENST00000491916 AKAP11Q9UKA4 1901 aa18.72■□□□□ 0.59
SS18L1-204ENST00000491916 PDS5AQ29RF7 1337 aaKnown RBP18.72■□□□□ 0.59
SS18L1-204ENST00000491916 SALL1Q9NSC2 1324 aa18.72■□□□□ 0.59
SS18L1-204ENST00000491916 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 CST9Q5W186 159 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 ERC1Q8IUD2 1116 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 WDR66Q8TBY9 1149 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
SS18L1-204ENST00000491916 CCDC8Q9H0W5 538 aaPredicted RBP18.71■□□□□ 0.59
SS18L1-204ENST00000491916 GNL3LQ9NVN8 582 aaKnown RBP18.71■□□□□ 0.59
SS18L1-204ENST00000491916 HDAC9Q9UKV0 1011 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
SS18L1-204ENST00000491916 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
SS18L1-204ENST00000491916 SPDYE2BA6NHP3 402 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 RAB11FIP3O75154 756 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 SPDYE6P0CI01 402 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 MCAMP43121 646 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 ANGEL2Q5VTE6 544 aaKnown RBP18.7■□□□□ 0.58
SS18L1-204ENST00000491916 PI16Q6UXB8 463 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 CDC37L1Q7L3B6 337 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 IL1RAPL2Q9NP60 686 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 HMG20BQ9P0W2 317 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 SCAF8Q9UPN6 1271 aaKnown RBP18.7■□□□□ 0.58
SS18L1-204ENST00000491916 SUGT1Q9Y2Z0 365 aa18.7■□□□□ 0.58
SS18L1-204ENST00000491916 ADM5C9JUS6 153 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 PRDX5P30044 214 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 DNAJC5GQ8N7S2 189 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
SS18L1-204ENST00000491916 MRIQ9BWK5 157 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms