RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	AMPH	P49418	695 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	UBE3B	Q7Z3V4	1068 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	LARP6	Q9BRS8	491 aa	Known RBP	12	□□□□□ -0.49
SREBF2-208	ENST00000491541	SBF2	Q86WG5	1849 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	STK36	Q9NRP7	1315 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	NSUN7	Q8NE18	718 aa	Known RBP	12	□□□□□ -0.49
SREBF2-208	ENST00000491541	IL17RE	Q8NFR9	667 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	SMC3	Q9UQE7	1217 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	STRCP1	A6NGW2	1772 aa		12	□□□□□ -0.49
SREBF2-208	ENST00000491541	CACNA1S	Q13698	1873 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	VWA3A	A6NCI4	1184 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	GORAB	Q5T7V8	394 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	SASH3	O75995	380 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	RAD51AP2	Q09MP3	1159 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	CERS3	Q8IU89	383 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	NRBP1	Q9UHY1	535 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	C10orf71	Q711Q0	1435 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	TULP1	O00294	542 aa	Predicted RBP	11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	PRPF6	O94906	941 aa	Known RBP	11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	PDIA6	Q15084	440 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	FILIP1	Q7Z7B0	1213 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	GREB1L	Q9C091	1923 aa	Predicted RBP	11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	DCC	P43146	1447 aa		11.99	□□□□□ -0.49
SREBF2-208	ENST00000491541	NUP98	P52948	1817 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	VSTM4	Q8IW00	320 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	MYO1A	Q9UBC5	1043 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	QSER1	Q2KHR3	1735 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	NLRP12	P59046	1061 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	SRL	Q86TD4	932 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	LUZP1	Q86V48	1076 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	CCAR1	Q8IX12	1150 aa	Known RBP	11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	TRIM5	Q9C035	493 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	ANO10	Q9NW15	660 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	ZNF646	O15015	1829 aa	Predicted RBP	11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	LRMP	Q12912	555 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	NAA30	Q147X3	362 aa	Predicted RBP	11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	TSHZ3	Q63HK5	1081 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	CLIP2	Q9UDT6	1046 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	TBX22	Q9Y458	520 aa		11.98	□□□□□ -0.49
SREBF2-208	ENST00000491541	C21orf2	O43822	256 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	SASH1	O94885	1247 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	TAF7	Q15545	349 aa	Predicted RBP	11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	SLC4A10	Q6U841	1118 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.97	□□□□□ -0.49	2e-9	■□□□□ 9
SREBF2-208	ENST00000491541	FBXO3	Q9UK99	471 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	GNAT3	A8MTJ3	354 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	DDR1	Q08345	913 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	MYH8	P13535	1937 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	HMOX1	P09601	288 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	AMPD2	Q01433	879 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	PANX2	Q96RD6	677 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	MAP3K14	Q99558	947 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	NAA15	Q9BXJ9	866 aa	Known RBP	11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	DACT1	Q9NYF0	836 aa		11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	LRRFIP2	Q9Y608	721 aa	Known RBP	11.97	□□□□□ -0.49
SREBF2-208	ENST00000491541	LRRC10B	A6NIK2	292 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	ZNF165	P49910	485 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	ARHGEF25	Q86VW2	580 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	TRIM34	Q9BYJ4	488 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	INTS13	Q9NVM9	706 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	ACE	P12821	1306 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	VPS37C	A5D8V6	355 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	STX10	O60499	249 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	CAMK4	Q16566	473 aa		11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.96	□□□□□ -0.49
SREBF2-208	ENST00000491541	FOXP2	O15409	715 aa		11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	EPB41	P11171	864 aa	Known RBP	11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	PTPN14	Q15678	1187 aa		11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	FOXR2	Q6PJQ5	311 aa		11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	ZNF579	Q8NAF0	562 aa	Known RBP	11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	TNMD	Q9H2S6	317 aa		11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	HELLS	Q9NRZ9	838 aa		11.96	□□□□□ -0.5
SREBF2-208	ENST00000491541	TARSL2	A2RTX5	802 aa	Known RBP	11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	POTEB2	H3BUK9	544 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	PSEN1	P49768	467 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	PTPA	Q15257	358 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	PPP1R42	Q7Z4L9	355 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	YTHDF3	Q7Z739	585 aa	Known RBP	11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	MAGEC3	Q8TD91	643 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	STAG1	Q8WVM7	1258 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	CEP89	Q96ST8	783 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	EYA1	Q99502	592 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	HAUS7	Q99871	368 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	RBM8A	Q9Y5S9	174 aa	Known RBP	11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	CMA1	P23946	247 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	HNRNPH2	P55795	449 aa	Known RBP	11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	BRAP	Q7Z569	592 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	TRIML1	Q8N9V2	468 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	LINC00301	Q8NCQ3	95 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	SH3GL2	Q99962	352 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	MKRN1	Q9UHC7	482 aa	Known RBP	11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	TAOK2	Q9UL54	1235 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	L1RE1	Q9UN81	338 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	CCDC69	A6NI79	296 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	HOXC9	P31274	260 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	PURB	Q96QR8	312 aa	Known RBP	11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	KIAA1468	Q9P260	1216 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	CORO7	P57737	925 aa		11.95	□□□□□ -0.5
SREBF2-208	ENST00000491541	TEX2	Q8IWB9	1127 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms