RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
NCK1-211ENST00000491539 SNAP23O00161 211 aa17.76■□□□□ 0.43
NCK1-211ENST00000491539 NF2P35240 595 aa17.76■□□□□ 0.43
NCK1-211ENST00000491539 FKBP5Q13451 457 aaPredicted RBP17.76■□□□□ 0.43
NCK1-211ENST00000491539 APOBEC3FQ8IUX4 373 aaKnown RBP17.76■□□□□ 0.43
NCK1-211ENST00000491539 TRIM17Q9Y577 477 aa17.76■□□□□ 0.43
NCK1-211ENST00000491539 H7C1W4 665 aa17.75■□□□□ 0.43
NCK1-211ENST00000491539 GJA5P36382 358 aa17.75■□□□□ 0.43
NCK1-211ENST00000491539 IFNL1Q8IU54 200 aa17.75■□□□□ 0.43
NCK1-211ENST00000491539 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
NCK1-211ENST00000491539 WNK4Q96J92 1243 aa17.75■□□□□ 0.43
NCK1-211ENST00000491539 COA1Q9GZY4 146 aa17.75■□□□□ 0.43
NCK1-211ENST00000491539 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
NCK1-211ENST00000491539 GTF2IP78347 998 aa17.74■□□□□ 0.43
NCK1-211ENST00000491539 GCKRQ14397 625 aa17.74■□□□□ 0.43
NCK1-211ENST00000491539 HABP4Q5JVS0 413 aaKnown RBP17.74■□□□□ 0.43
NCK1-211ENST00000491539 ARMC9Q7Z3E5 817 aa17.74■□□□□ 0.43
NCK1-211ENST00000491539 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
NCK1-211ENST00000491539 OGFOD1Q8N543 542 aa17.74■□□□□ 0.43
NCK1-211ENST00000491539 CEP290O15078 2479 aa17.73■□□□□ 0.43
NCK1-211ENST00000491539 CASP7P55210 303 aa17.73■□□□□ 0.43
NCK1-211ENST00000491539 LINS1Q8NG48 757 aa17.73■□□□□ 0.43
NCK1-211ENST00000491539 CD99L2Q8TCZ2 262 aa17.73■□□□□ 0.43
NCK1-211ENST00000491539 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 CRHR2Q13324 411 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 TTLL5Q6EMB2 1281 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 CDAN1Q8IWY9 1227 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 DEFB129Q9H1M3 183 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 JAG2Q9Y219 1238 aa17.72■□□□□ 0.43
NCK1-211ENST00000491539 ITGA6P23229 1130 aa17.71■□□□□ 0.43
NCK1-211ENST00000491539 MAP3K11Q16584 847 aa17.71■□□□□ 0.43
NCK1-211ENST00000491539 MANSC4A6NHS7 340 aaPredicted RBP17.7■□□□□ 0.42
NCK1-211ENST00000491539 F8W031 263 aaPredicted RBP17.7■□□□□ 0.42
NCK1-211ENST00000491539 LEMD3Q9Y2U8 911 aa17.7■□□□□ 0.42
NCK1-211ENST00000491539 TRIOBPQ9H2D6 2365 aa17.69■□□□□ 0.42
NCK1-211ENST00000491539 MGAMO43451 1857 aa17.69■□□□□ 0.42
NCK1-211ENST00000491539 F6X3S4 739 aa17.69■□□□□ 0.42
NCK1-211ENST00000491539 ZBTB48P10074 688 aaPredicted RBP17.69■□□□□ 0.42
NCK1-211ENST00000491539 CHRNDQ07001 517 aa17.69■□□□□ 0.42
NCK1-211ENST00000491539 BEND3Q5T5X7 828 aa17.69■□□□□ 0.42
NCK1-211ENST00000491539 NBPF12Q5TAG4 269 aaPredicted RBP17.69■□□□□ 0.42
NCK1-211ENST00000491539 PTPN18Q99952 460 aa17.69■□□□□ 0.42
NCK1-211ENST00000491539 CCER2I3L3R5 266 aa17.68■□□□□ 0.42
NCK1-211ENST00000491539 TAF5LO75529 589 aa17.68■□□□□ 0.42
NCK1-211ENST00000491539 ALDH1A1P00352 501 aa17.68■□□□□ 0.42
NCK1-211ENST00000491539 EN2P19622 333 aaPredicted RBP17.68■□□□□ 0.42
NCK1-211ENST00000491539 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
NCK1-211ENST00000491539 CD209Q9NNX6 404 aa17.68■□□□□ 0.42
NCK1-211ENST00000491539 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
NCK1-211ENST00000491539 RANBP2P49792 3224 aaKnown RBP17.67■□□□□ 0.42
NCK1-211ENST00000491539 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 E9PSI1 815 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 CSF1RP07333 972 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 FXR1P51114 621 aaKnown RBP eCLIP17.67■□□□□ 0.42
NCK1-211ENST00000491539 DLGAP5Q15398 846 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 CFAP100Q494V2 611 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
NCK1-211ENST00000491539 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 ARMC5Q96C12 935 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 GCC1Q96CN9 775 aa17.67■□□□□ 0.42
NCK1-211ENST00000491539 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
NCK1-211ENST00000491539 MTMR14Q8NCE2 650 aa17.66■□□□□ 0.42
NCK1-211ENST00000491539 SLC10A4Q96EP9 437 aa17.66■□□□□ 0.42
NCK1-211ENST00000491539 PRMT6Q96LA8 375 aaPredicted RBP17.66■□□□□ 0.42
NCK1-211ENST00000491539 VEZTQ9HBM0 779 aa17.66■□□□□ 0.42
NCK1-211ENST00000491539 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
NCK1-211ENST00000491539 ANKRD2Q9GZV1 360 aa17.65■□□□□ 0.42
NCK1-211ENST00000491539 ELP3Q9H9T3 547 aa17.65■□□□□ 0.42
NCK1-211ENST00000491539 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
NCK1-211ENST00000491539 DOCK2Q92608 1830 aa17.65■□□□□ 0.42
NCK1-211ENST00000491539 USP2O75604 605 aaPredicted RBP17.64■□□□□ 0.41
NCK1-211ENST00000491539 KCNJ4P48050 445 aa17.64■□□□□ 0.41
NCK1-211ENST00000491539 ERO1AQ96HE7 468 aa17.64■□□□□ 0.41
NCK1-211ENST00000491539 PTPRFP10586 1907 aa17.63■□□□□ 0.41
NCK1-211ENST00000491539 FOXO4P98177 505 aa17.63■□□□□ 0.41
NCK1-211ENST00000491539 MRPL50Q8N5N7 158 aaKnown RBP17.63■□□□□ 0.41
NCK1-211ENST00000491539 ZNF333Q96JL9 665 aa17.63■□□□□ 0.41
NCK1-211ENST00000491539 MPHOSPH8Q99549 860 aa17.63■□□□□ 0.41
NCK1-211ENST00000491539 PTCH2Q9Y6C5 1203 aa17.63■□□□□ 0.41
NCK1-211ENST00000491539 GRM8O00222 908 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 PPP1R12BO60237 982 aaPredicted RBP17.62■□□□□ 0.41
NCK1-211ENST00000491539 ALDH1L1O75891 902 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 IL1R1P14778 569 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 RASA3Q14644 834 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
NCK1-211ENST00000491539 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
NCK1-211ENST00000491539 BRI3BPQ8WY22 251 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 OPTNQ96CV9 577 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 EFCC1Q9HA90 598 aa17.62■□□□□ 0.41
NCK1-211ENST00000491539 TESPA1A2RU30 521 aaPredicted RBP17.61■□□□□ 0.41
NCK1-211ENST00000491539 MMP14P50281 582 aa17.61■□□□□ 0.41
NCK1-211ENST00000491539 INHBEP58166 350 aa17.61■□□□□ 0.41
NCK1-211ENST00000491539 C15orf52Q6ZUT6 534 aaKnown RBP17.61■□□□□ 0.41
NCK1-211ENST00000491539 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
NCK1-211ENST00000491539 MS4A4AQ96JQ5 239 aa17.61■□□□□ 0.41
NCK1-211ENST00000491539 TEPSINQ96N21 525 aa17.61■□□□□ 0.41
NCK1-211ENST00000491539 MYCP01106 439 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms