RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 WDR43Q15061 677 aaKnown RBP eCLIP9.88□□□□□ -0.83
NECTIN3-210ENST00000491525 TAF7Q15545 349 aaPredicted RBP9.88□□□□□ -0.83
NECTIN3-210ENST00000491525 NLGN1Q8N2Q7 840 aa9.88□□□□□ -0.83
NECTIN3-210ENST00000491525 TEX13AQ9BXU3 409 aaPredicted RBP9.88□□□□□ -0.83
NECTIN3-210ENST00000491525 NXF1Q9UBU9 619 aaKnown RBP9.88□□□□□ -0.83
NECTIN3-210ENST00000491525 PRAMEF22A3QJZ6 481 aa9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 EIF5P55010 431 aaKnown RBP9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 DHX9Q08211 1270 aaKnown RBP9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 C6orf118Q5T5N4 469 aa9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 RUNDC1Q96C34 613 aa9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 KCTD15Q96SI1 283 aaPredicted RBP9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 ADAMTS8Q9UP79 889 aa9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 KIAA1551Q9HCM1 1747 aa9.87□□□□□ -0.83
NECTIN3-210ENST00000491525 KIF13BQ9NQT8 1826 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 PXDNLA1KZ92 1463 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 LAMB4A4D0S4 1761 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 A1BGP04217 495 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 SNRPA1P09661 255 aaKnown RBP9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 BMP2P12643 396 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 CANXP27824 592 aaKnown RBP9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 RIPK4P57078 832 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 DDR1Q08345 913 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 CCDC184Q52MB2 194 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 USPL1Q5W0Q7 1092 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 PNISRQ8TF01 805 aaKnown RBP9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 HMX1Q9NP08 348 aaPredicted RBP9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 NARFQ9UHQ1 456 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 USP16Q9Y5T5 823 aa9.86□□□□□ -0.83
NECTIN3-210ENST00000491525 IL6STP40189 918 aaPredicted RBP9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 EIF4A1P60842 406 aaKnown RBP9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 LMOD3Q0VAK6 560 aa9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 NPAS3Q8IXF0 933 aa9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 MEIOBQ8N635 442 aa9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 ADAM32Q8TC27 787 aa9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 EPS8L1Q8TE68 723 aa9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 TSEN34Q9BSV6 310 aaKnown RBP9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 RRP7AQ9Y3A4 280 aaKnown RBP9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 NRXN2Q9P2S2 1712 aa9.85□□□□□ -0.83
NECTIN3-210ENST00000491525 UTRNP46939 3433 aa9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 BCORQ6W2J9 1755 aa9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 POLRMTO00411 1230 aaKnown RBP9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 MAN1A2O60476 641 aa9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 YBX3P16989 372 aaKnown RBP eCLIP9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 TM4SF1P30408 202 aa9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 NBPF20Q3BBV1 942 aa9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 PPP1R26Q5T8A7 1209 aaPredicted RBP9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 DZIP3Q86Y13 1208 aaKnown RBP9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 LINC00528Q8N1L1 170 aa9.84□□□□□ -0.83
NECTIN3-210ENST00000491525 A0A087WZG4 1122 aa9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 GIGYF1O75420 1035 aaPredicted RBP9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 CAMTA2O94983 1202 aa9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 PIP4K2AP48426 406 aaPredicted RBP9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 NFIXQ14938 502 aa9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 NBPF15Q8N660 670 aa9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 BABAM1Q9NWV8 329 aa9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 PARP3Q9Y6F1 533 aa9.83□□□□□ -0.84
NECTIN3-210ENST00000491525 GPR162Q16538 588 aa9.82□□□□□ -0.84
NECTIN3-210ENST00000491525 TSPYL4Q9UJ04 414 aa9.82□□□□□ -0.84
NECTIN3-210ENST00000491525 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
NECTIN3-210ENST00000491525 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 CARMIL3Q8ND23 1372 aa9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 CHL1O00533 1208 aa9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 APAF1O14727 1248 aa9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 ANP32CO43423 234 aa9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 TGFB2P61812 414 aa9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 TBC1D2BQ9UPU7 963 aa9.81□□□□□ -0.84
NECTIN3-210ENST00000491525 AFDNP55196 1824 aaKnown RBP9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 YY1P25490 414 aa9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 INSM1Q01101 510 aaPredicted RBP9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 TBC1D9BQ66K14 1250 aa9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 IRF7Q92985 503 aa9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 OCSTAMPQ9BR26 566 aa9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 BRCA1P38398 1863 aaKnown RBP9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 N4BP2Q86UW6 1770 aaPredicted RBP9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 ERBB4Q15303 1308 aa9.8□□□□□ -0.84
NECTIN3-210ENST00000491525 A0A0G2JLW4 131 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 WIPF1O43516 503 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 GRIN3BO60391 1043 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 SERPINB2P05120 415 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 DPEP1P16444 411 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 KCNA3P22001 575 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 INTS6LQ5JSJ4 861 aaKnown RBP9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 LRP10Q7Z4F1 713 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
NECTIN3-210ENST00000491525 SOBPA7XYQ1 873 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 APBB1O00213 710 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 ZNF853P0CG23 659 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 KRT24Q2M2I5 525 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 CLEC4GQ6UXB4 293 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 NPM2Q86SE8 214 aaKnown RBP9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
NECTIN3-210ENST00000491525 ATP10DQ9P241 1426 aa9.77□□□□□ -0.85
NECTIN3-210ENST00000491525 ZBBXA8MT70 800 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms