RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
USP34-218ENST00000490552 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
USP34-218ENST00000490552 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
USP34-218ENST00000490552 DPP8Q6V1X1 898 aaPredicted RBP11.34□□□□□ -0.59
USP34-218ENST00000490552 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
USP34-218ENST00000490552 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
USP34-218ENST00000490552 LRP2BPQ9P2M1 347 aa11.34□□□□□ -0.59
USP34-218ENST00000490552 SALL1Q9NSC2 1324 aa11.34□□□□□ -0.59
USP34-218ENST00000490552 PRPF40BQ6NWY9 871 aaKnown RBP11.33□□□□□ -0.59
USP34-218ENST00000490552 TDRD7Q8NHU6 1098 aaKnown RBP11.33□□□□□ -0.59
USP34-218ENST00000490552 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.59
USP34-218ENST00000490552 PDGFDQ9GZP0 370 aaPredicted RBP11.33□□□□□ -0.59
USP34-218ENST00000490552 U3KPZ7 1027 aaPredicted RBP11.33□□□□□ -0.59
USP34-218ENST00000490552 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
USP34-218ENST00000490552 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 IL1R1P14778 569 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 PDE6AP16499 860 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 SOGA3Q5TF21 947 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 SNX21Q969T3 373 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
USP34-218ENST00000490552 COA1Q9GZY4 146 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 IL25Q9H293 177 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
USP34-218ENST00000490552 DUOX1Q9NRD9 1551 aa11.33□□□□□ -0.6
USP34-218ENST00000490552 ST18O60284 1047 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 R3HDM1Q15032 1099 aaKnown RBP11.32□□□□□ -0.6
USP34-218ENST00000490552 TTLL6Q8N841 843 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 KIF2CQ99661 725 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 POLLQ9UGP5 575 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 MAST3O60307 1309 aa11.32□□□□□ -0.6
USP34-218ENST00000490552 LTBP1Q14766 1721 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 ZBTB7AO95365 584 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 GNAT2P19087 354 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 KLRK1P26718 216 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 KRT32Q14532 448 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
USP34-218ENST00000490552 KCNB2Q92953 911 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
USP34-218ENST00000490552 CD209Q9NNX6 404 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 ABCF2Q9UG63 623 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 DOCK2Q92608 1830 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 PSMA5P28066 241 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 CHRNA5P30532 468 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 MCM2P49736 904 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 TSGA10IPQ3SY00 556 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 TXNRD3Q86VQ6 643 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 OSBP2Q969R2 916 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 AIDAQ96BJ3 306 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
USP34-218ENST00000490552 RBM8AQ9Y5S9 174 aaKnown RBP11.31□□□□□ -0.6
USP34-218ENST00000490552 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
USP34-218ENST00000490552 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 MYH7P12883 1935 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 TCRBV5S4A2TA0A5A2 114 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
USP34-218ENST00000490552 GSTO1P78417 241 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 PTH1RQ03431 593 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 TM6SF1Q9BZW5 370 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 IQSEC3Q9UPP2 1182 aaPredicted RBP11.3□□□□□ -0.6
USP34-218ENST00000490552 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
USP34-218ENST00000490552 G3V3G9 751 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 GPAA1O43292 621 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
USP34-218ENST00000490552 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 PODNQ7Z5L7 613 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 SLF2Q8IX21 1173 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 SEC62Q99442 399 aaKnown RBP11.29□□□□□ -0.6
USP34-218ENST00000490552 PUS7LQ9H0K6 701 aaKnown RBP11.29□□□□□ -0.6
USP34-218ENST00000490552 PIM2Q9P1W9 311 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
USP34-218ENST00000490552 COL1A1P02452 1464 aaPredicted RBP11.29□□□□□ -0.6
USP34-218ENST00000490552 ZMYM6O95789 1325 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 FAM205AQ6ZU69 1335 aa11.29□□□□□ -0.6
USP34-218ENST00000490552 M0R2C6 588 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 LDHCP07864 332 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 CCDC93Q567U6 631 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 CREB3L3Q68CJ9 461 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 NAA16Q6N069 864 aaPredicted RBP11.28□□□□□ -0.6
USP34-218ENST00000490552 SNX14Q9Y5W7 946 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
USP34-218ENST00000490552 HMGB1P09429 215 aaKnown RBP11.28□□□□□ -0.6
USP34-218ENST00000490552 DPEP1P16444 411 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 CYP7A1P22680 504 aa11.28□□□□□ -0.6
USP34-218ENST00000490552 CHAF1AQ13111 956 aaPredicted RBP11.28□□□□□ -0.6
USP34-218ENST00000490552 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms