RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
TM9SF3-206ENST00000490192 hCG_2014768A0A024R1R8 64 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 PIK3R2O00459 728 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 RAB11FIP3O75154 756 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 FCGRTP55899 365 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 IGBP1P78318 339 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 KCNB2Q92953 911 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 TRIM55Q9BYV6 548 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 AVENQ9NQS1 362 aaPredicted RBP9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 LATS2Q9NRM7 1088 aa9.26□□□□□ -0.93
TM9SF3-206ENST00000490192 A0A1W2PP55 124 aa9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 SHISA8B8ZZ34 492 aa9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 TYRO3Q06418 890 aa9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 MAP3K11Q16584 847 aa9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 TTC39BQ5VTQ0 682 aaPredicted RBP9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 C1orf229Q6ZS94 237 aaPredicted RBP9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 STRIP2Q9ULQ0 834 aa9.25□□□□□ -0.93
TM9SF3-206ENST00000490192 U2SURPO15042 1029 aaKnown RBP9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 KLF4O43474 513 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 EGFRP00533 1210 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 EPXP11678 715 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 IBSPP21815 317 aaPredicted RBP9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 SOX9P48436 509 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 NEUROD1Q13562 356 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 RNF187Q5TA31 235 aaPredicted RBP9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 MICAL1Q8TDZ2 1067 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 HNRNPLLQ8WVV9 542 aaKnown RBP9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 CEP63Q96MT8 703 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 KANSL3Q9P2N6 904 aa9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
TM9SF3-206ENST00000490192 ENPP3O14638 875 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 EFSO43281 561 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 MARCH6O60337 910 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 FBXO24O75426 580 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 CYP2E1P05181 493 aaPredicted RBP9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 FBXL19Q6PCT2 694 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 BTBD6Q96KE9 485 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 RNPC3Q96LT9 517 aaKnown RBP9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 NT5C1AQ9BXI3 368 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 PPM1HQ9ULR3 514 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 AKAP2Q9Y2D5 859 aa9.23□□□□□ -0.93
TM9SF3-206ENST00000490192 RLBP1P12271 317 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 EDN3P14138 238 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 ALAS2P22557 587 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 PCBP4P57723 403 aaKnown RBP9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 SNRPNP63162 240 aaKnown RBP9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 RAB33AQ14088 237 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 ZNF468Q5VIY5 522 aaPredicted RBP9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 CPLX3Q8WVH0 158 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 RHOVQ96L33 236 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 SNTG2Q9NY99 539 aa9.22□□□□□ -0.93
TM9SF3-206ENST00000490192 COL9A2Q14055 689 aaPredicted RBP9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 DTHD1Q6ZMT9 781 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 SV2BQ7L1I2 683 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 PHC3Q8NDX5 983 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 ANAPC16Q96DE5 110 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 ABCB6Q9NP58 842 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 KCNQ5Q9NR82 932 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 STRN4Q9NRL3 753 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 UBP1Q9NZI7 540 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 TLR6Q9Y2C9 796 aa9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 SUPT16HQ9Y5B9 1047 aaKnown RBP9.21□□□□□ -0.94
TM9SF3-206ENST00000490192 TMEM238LA0A1B0GVL6 79 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 GARTP22102 1010 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 ANAPC15P60006 121 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 ZCRB1Q8TBF4 217 aaKnown RBP9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 ANKRD24Q8TF21 1146 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 DEPDC7Q96QD5 511 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 BRD7Q9NPI1 651 aa9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 NOP58Q9Y2X3 529 aaKnown RBP9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 R3HCC1Q9Y3T6 440 aaKnown RBP9.2□□□□□ -0.94
TM9SF3-206ENST00000490192 FAM221BA6H8Z2 402 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 GREM1O60565 184 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 IGHA1P01876 353 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 PF4P02776 101 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 LIG3P49916 1009 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 RASA3Q14644 834 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 TPTE2Q6XPS3 522 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 SYT9Q86SS6 491 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 POLR3GLQ9BT43 218 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 BRINP2Q9C0B6 783 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 LIN7BQ9HAP6 207 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 C11orf16Q9NQ32 467 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 PRKAG3Q9UGI9 489 aa9.19□□□□□ -0.94
TM9SF3-206ENST00000490192 CCDC85CA6NKD9 419 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 SASH3O75995 380 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 CHSY3Q70JA7 882 aa9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 NOL8Q76FK4 1167 aaKnown RBP9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 ALYREFQ86V81 257 aaKnown RBP9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 SRRTQ9BXP5 876 aaKnown RBP9.18□□□□□ -0.94
TM9SF3-206ENST00000490192 IFT57Q9NWB7 429 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms