RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 IL16Q14005 1332 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 NEURL1BA8MQ27 555 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 SLC10A3P09131 477 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
UBP1-211ENST00000490112 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
UBP1-211ENST00000490112 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
UBP1-211ENST00000490112 KIF23Q02241 960 aaPredicted RBP13.67□□□□□ -0.22
UBP1-211ENST00000490112 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
UBP1-211ENST00000490112 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 ZIC5Q96T25 663 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 GREM2Q9H772 168 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 MINPP1Q9UNW1 487 aa13.67□□□□□ -0.22
UBP1-211ENST00000490112 H7C1W4 665 aa13.66□□□□□ -0.22
UBP1-211ENST00000490112 STRIP1Q5VSL9 837 aa13.66□□□□□ -0.22
UBP1-211ENST00000490112 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
UBP1-211ENST00000490112 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
UBP1-211ENST00000490112 COA1Q9GZY4 146 aa13.66□□□□□ -0.22
UBP1-211ENST00000490112 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
UBP1-211ENST00000490112 AKAP11Q9UKA4 1901 aa13.66□□□□□ -0.22
UBP1-211ENST00000490112 TRPA1O75762 1119 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 EMP3P54852 163 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 CWF19L2Q2TBE0 894 aaKnown RBP13.65□□□□□ -0.22
UBP1-211ENST00000490112 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 CSRNP1Q96S65 589 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 RNF186Q9NXI6 227 aa13.65□□□□□ -0.22
UBP1-211ENST00000490112 ASTN2O75129 1339 aaPredicted RBP13.64□□□□□ -0.23
UBP1-211ENST00000490112 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
UBP1-211ENST00000490112 NF2P35240 595 aa13.64□□□□□ -0.23
UBP1-211ENST00000490112 GCKRQ14397 625 aa13.64□□□□□ -0.23
UBP1-211ENST00000490112 DACT2Q5SW24 774 aa13.64□□□□□ -0.23
UBP1-211ENST00000490112 HDAC9Q9UKV0 1011 aa13.64□□□□□ -0.23
UBP1-211ENST00000490112 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 ITGA6P23229 1130 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 FLIIQ13045 1269 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 RASAL3Q86YV0 1011 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 LINS1Q8NG48 757 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
UBP1-211ENST00000490112 CSF1RP07333 972 aa13.62□□□□□ -0.23
UBP1-211ENST00000490112 KCNJ4P48050 445 aa13.62□□□□□ -0.23
UBP1-211ENST00000490112 PSEN1P49768 467 aa13.62□□□□□ -0.23
UBP1-211ENST00000490112 FKBP5Q13451 457 aaPredicted RBP13.62□□□□□ -0.23
UBP1-211ENST00000490112 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
UBP1-211ENST00000490112 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
UBP1-211ENST00000490112 SPEF2Q9C093 1822 aa13.62□□□□□ -0.23
UBP1-211ENST00000490112 TNRC18O15417 2968 aaPredicted RBP13.61□□□□□ -0.23
UBP1-211ENST00000490112 WNT10BO00744 389 aa13.61□□□□□ -0.23
UBP1-211ENST00000490112 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
UBP1-211ENST00000490112 NBPF9Q3BBW0 867 aa13.61□□□□□ -0.23
UBP1-211ENST00000490112 G2E3Q7L622 706 aa13.61□□□□□ -0.23
UBP1-211ENST00000490112 APOBEC3FQ8IUX4 373 aaKnown RBP13.61□□□□□ -0.23
UBP1-211ENST00000490112 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
UBP1-211ENST00000490112 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
UBP1-211ENST00000490112 WTIPA6NIX2 430 aaPredicted RBP13.6□□□□□ -0.23
UBP1-211ENST00000490112 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
UBP1-211ENST00000490112 CASP7P55210 303 aa13.6□□□□□ -0.23
UBP1-211ENST00000490112 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
UBP1-211ENST00000490112 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
UBP1-211ENST00000490112 PKN2Q16513 984 aaKnown RBP13.59□□□□□ -0.23
UBP1-211ENST00000490112 ARMC9Q7Z3E5 817 aa13.59□□□□□ -0.23
UBP1-211ENST00000490112 CTU1Q7Z7A3 348 aaKnown RBP13.59□□□□□ -0.23
UBP1-211ENST00000490112 TM4SF4P48230 202 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 GTF2IP78347 998 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 CHRNDQ07001 517 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 SREBF2Q12772 1141 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 NOM1Q5C9Z4 860 aaKnown RBP13.58□□□□□ -0.24
UBP1-211ENST00000490112 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
UBP1-211ENST00000490112 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 MXD3Q9BW11 206 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 COL1A1P02452 1464 aaPredicted RBP13.58□□□□□ -0.24
UBP1-211ENST00000490112 FANCIQ9NVI1 1328 aa13.58□□□□□ -0.24
UBP1-211ENST00000490112 VAMP4O75379 141 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 DLGAP5Q15398 846 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 KIAA0825Q8IV33 1275 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
UBP1-211ENST00000490112 ZNF646O15015 1829 aaPredicted RBP13.57□□□□□ -0.24
UBP1-211ENST00000490112 UNCXA6NJT0 531 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 MYO1BO43795 1136 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 SASH1O94885 1247 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 INHBEP58166 350 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 FKBP1AP62942 108 aaKnown RBP13.56□□□□□ -0.24
UBP1-211ENST00000490112 CCDC184Q52MB2 194 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 PRAMEF18Q5VWM3 479 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 MOB2Q70IA6 237 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 ZBED3Q96IU2 234 aaPredicted RBP13.56□□□□□ -0.24
UBP1-211ENST00000490112 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 SCAF8Q9UPN6 1271 aaKnown RBP13.56□□□□□ -0.24
UBP1-211ENST00000490112 PPP2R3BQ9Y5P8 575 aa13.56□□□□□ -0.24
UBP1-211ENST00000490112 ANP32CO43423 234 aa13.55□□□□□ -0.24
UBP1-211ENST00000490112 ALDH1A1P00352 501 aa13.55□□□□□ -0.24
UBP1-211ENST00000490112 IL1R1P14778 569 aa13.55□□□□□ -0.24
UBP1-211ENST00000490112 CCDC57Q2TAC2 916 aa13.55□□□□□ -0.24
UBP1-211ENST00000490112 CFHR5Q9BXR6 569 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms