RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 DHX32Q7L7V1 743 aaKnown RBP9.99□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC50Q8IVM0 306 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 DCTPP1Q9H773 170 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 STX8Q9UNK0 236 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 HDXQ7Z353 690 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 LZTS2Q9BRK4 669 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 TMEM87BQ96K49 555 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 IFT74Q96LB3 600 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 CDCA7Q9BWT1 371 aaPredicted RBP9.99□□□□□ -0.81
LSAMP-205ENST00000490035 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
LSAMP-205ENST00000490035 STIM2Q9P246 746 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 ACEP12821 1306 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 PHACTR2O75167 634 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 ZCRB1Q8TBF4 217 aaKnown RBP9.99□□□□□ -0.81
LSAMP-205ENST00000490035 ANAPC4Q9UJX5 808 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 MAP3K5Q99683 1374 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 F6X3S4 739 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 RILPL1Q5EBL4 403 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 MSL1Q68DK7 614 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 HOOK2Q96ED9 719 aa9.99□□□□□ -0.81
LSAMP-205ENST00000490035 MAGEB6P1A0A0J9YX57 407 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 NBPF6Q5VWK0 638 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 NBPF5PQ86XG9 351 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 CPLX3Q8WVH0 158 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 NBPF4Q96M43 638 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 TSKSQ9UJT2 592 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 FRMD4BQ9Y2L6 1034 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC6Q16204 474 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 ADGRF5Q8IZF2 1346 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 PPP2R5EQ16537 467 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 TFIP11Q9UBB9 837 aaKnown RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 NPATQ14207 1427 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 XPCQ01831 940 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 MAP7D1Q3KQU3 841 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 NAPAP54920 295 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 CNNM4Q6P4Q7 775 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 HCLS1P14317 486 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 TYRO3Q06418 890 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 Q6ZUG5 572 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 USP48Q86UV5 1035 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 LUC7L2Q9Y383 392 aaKnown RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 SLC4A4Q9Y6R1 1079 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 DISP3Q9P2K9 1392 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-205ENST00000490035 CYP7A1P22680 504 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 MNAT1P51948 309 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 TERF1P54274 439 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 EYA3Q99504 573 aa9.98□□□□□ -0.81
LSAMP-205ENST00000490035 ACTN4O43707 911 aaKnown RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 MAST3O60307 1309 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 SH3BGRP55822 239 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 SETDB1Q15047 1291 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC121Q6ZUS5 278 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 TNNI2P48788 182 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 MRPL50Q8N5N7 158 aaKnown RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 EMILIN1Q9Y6C2 1016 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 HOXA7P31268 230 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 FCHSD1Q86WN1 690 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 CDAN1Q8IWY9 1227 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 PUF60Q9UHX1 559 aaKnown RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 TTF2Q9UNY4 1162 aaKnown RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 HAUS3Q68CZ6 603 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 NBPF11Q86T75 865 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 FAM13AO94988 1023 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 ASIC1P78348 528 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 TTLL12Q14166 644 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 CFAP58Q5T655 872 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 AFAP1L2Q8N4X5 818 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 SMARCC2Q8TAQ2 1214 aa9.97□□□□□ -0.81
LSAMP-205ENST00000490035 FEZ2Q9UHY8 353 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
LSAMP-205ENST00000490035 BIN1O00499 593 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.81
LSAMP-205ENST00000490035 NOL3O60936 208 aaKnown RBP9.96□□□□□ -0.81
LSAMP-205ENST00000490035 OTUD6BQ8N6M0 293 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 TRIM7Q9C029 511 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 CALCOCO2Q13137 446 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 BRF1Q92994 677 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 SAMD15Q9P1V8 674 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 SLC8A3P57103 927 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 FAM184BQ9ULE4 1060 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 WDR62O43379 1518 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 GMNNO75496 209 aa9.96□□□□□ -0.81
LSAMP-205ENST00000490035 EPB41P11171 864 aaKnown RBP9.96□□□□□ -0.82
LSAMP-205ENST00000490035 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 RIMS2Q9UQ26 1411 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 ZBTB16Q05516 673 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 GSTA5Q7RTV2 222 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 DENND2AQ9ULE3 1009 aa9.96□□□□□ -0.82
LSAMP-205ENST00000490035 ODF2LQ9ULJ1 636 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms