RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ECE2O60344 883 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 MCAMP43121 646 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 TTC22Q5TAA0 569 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 TSHZ3Q63HK5 1081 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 SPATA5Q8NB90 893 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 BOLA2Q9H3K6 86 aa16.91■□□□□ 0.3
C9orf3-221ENST00000489562 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
C9orf3-221ENST00000489562 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
C9orf3-221ENST00000489562 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
C9orf3-221ENST00000489562 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
C9orf3-221ENST00000489562 ZNRF3Q9ULT6 936 aa16.9■□□□□ 0.3
C9orf3-221ENST00000489562 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
C9orf3-221ENST00000489562 COL4A5P29400 1685 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 COL1A1P02452 1464 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-221ENST00000489562 IGSF3O75054 1194 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 SCARF1Q14162 830 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 TTF1Q15361 905 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-221ENST00000489562 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
C9orf3-221ENST00000489562 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 TBC1D22AQ8WUA7 517 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 IQSEC3Q9UPP2 1182 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-221ENST00000489562 MAST2Q6P0Q8 1798 aa16.89■□□□□ 0.29
C9orf3-221ENST00000489562 BMP2KLQ5H9B9 411 aa16.88■□□□□ 0.29
C9orf3-221ENST00000489562 TICAM2Q86XR7 235 aa16.88■□□□□ 0.29
C9orf3-221ENST00000489562 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
C9orf3-221ENST00000489562 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
C9orf3-221ENST00000489562 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
C9orf3-221ENST00000489562 ZAP70P43403 619 aa16.87■□□□□ 0.29
C9orf3-221ENST00000489562 FKBP1AP62942 108 aaKnown RBP16.87■□□□□ 0.29
C9orf3-221ENST00000489562 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
C9orf3-221ENST00000489562 CNTROBQ8N137 903 aa16.87■□□□□ 0.29
C9orf3-221ENST00000489562 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
C9orf3-221ENST00000489562 USP17L3A6NCW0 530 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 USP17L4A6NCW7 530 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 PRELPP51888 382 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 CHAF1AQ13111 956 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-221ENST00000489562 SPTY2D1Q68D10 685 aaPredicted RBP16.86■□□□□ 0.29
C9orf3-221ENST00000489562 TTLL5Q6EMB2 1281 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 PI16Q6UXB8 463 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 USP17L1Q7RTZ2 530 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
C9orf3-221ENST00000489562 RFX7Q2KHR2 1363 aa16.86■□□□□ 0.29
C9orf3-221ENST00000489562 YDJCA8MPS7 323 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 FZD9O00144 591 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 GOLIM4O00461 696 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 CYP2E1P05181 493 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-221ENST00000489562 GSPT1P15170 499 aaKnown RBP16.85■□□□□ 0.29
C9orf3-221ENST00000489562 EIF6P56537 245 aaKnown RBP16.85■□□□□ 0.29
C9orf3-221ENST00000489562 GTF2IP78347 998 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
C9orf3-221ENST00000489562 TMED8Q6PL24 325 aaPredicted RBP16.85■□□□□ 0.29
C9orf3-221ENST00000489562 RNF181Q9P0P0 153 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 SUGT1Q9Y2Z0 365 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 MYO3BQ8WXR4 1341 aa16.85■□□□□ 0.29
C9orf3-221ENST00000489562 TNIP1Q15025 636 aa16.84■□□□□ 0.29
C9orf3-221ENST00000489562 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
C9orf3-221ENST00000489562 KBTBD3Q8NAB2 608 aa16.84■□□□□ 0.29
C9orf3-221ENST00000489562 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.29
C9orf3-221ENST00000489562 MYH2Q9UKX2 1941 aa16.84■□□□□ 0.29
C9orf3-221ENST00000489562 SDSP20132 328 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 DACT2Q5SW24 774 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 C9orf131Q5VYM1 1079 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 CIAPIN1Q6FI81 312 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 RILPL2Q969X0 211 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
C9orf3-221ENST00000489562 MAST3O60307 1309 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 MAP4K4O95819 1239 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-221ENST00000489562 VIL1P09327 827 aaKnown RBP16.82■□□□□ 0.28
C9orf3-221ENST00000489562 CXCL9Q07325 125 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 ERICH6Q7L0X2 663 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 FSD1Q9BTV5 496 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
C9orf3-221ENST00000489562 LRP2BPQ9P2M1 347 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 ABCF2Q9UG63 623 aa16.82■□□□□ 0.28
C9orf3-221ENST00000489562 GOLGB1Q14789 3259 aaKnown RBP16.82■□□□□ 0.28
C9orf3-221ENST00000489562 HIP1O00291 1037 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 RAD17O75943 681 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 LDHBP07195 334 aaKnown RBP16.81■□□□□ 0.28
C9orf3-221ENST00000489562 ZFYP08048 801 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-221ENST00000489562 MMP14P50281 582 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 TBC1D9Q6ZT07 1266 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 AGBL3Q8NEM8 1001 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 EDC3Q96F86 508 aaKnown RBP16.81■□□□□ 0.28
C9orf3-221ENST00000489562 KCNQ5Q9NR82 932 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 JAG2Q9Y219 1238 aa16.81■□□□□ 0.28
C9orf3-221ENST00000489562 PSMD14O00487 310 aa16.8■□□□□ 0.28
C9orf3-221ENST00000489562 IDH1O75874 414 aaKnown RBP16.8■□□□□ 0.28
C9orf3-221ENST00000489562 RPS12P25398 132 aaKnown RBP16.8■□□□□ 0.28
C9orf3-221ENST00000489562 RSBN1LQ6PCB5 846 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-221ENST00000489562 RAI14Q9P0K7 980 aa16.8■□□□□ 0.28
C9orf3-221ENST00000489562 PRDX5P30044 214 aa16.79■□□□□ 0.28
C9orf3-221ENST00000489562 GSTO1P78417 241 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms