RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SNRKQ9NRH2 765 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 YDJCA8MPS7 323 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 ERC2O15083 957 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 ATP5JP18859 108 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 GTF2IP78347 998 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 ZNF512BQ96KM6 892 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-209ENST00000489485 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 AKAP11Q9UKA4 1901 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 SEMA3EO15041 775 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 RAD17O75943 681 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 TTLL5Q6EMB2 1281 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 SPATA5Q8NB90 893 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
CLDN11-209ENST00000489485 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
CLDN11-209ENST00000489485 PI4K2BQ8TCG2 481 aa17.35■□□□□ 0.37
CLDN11-209ENST00000489485 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
CLDN11-209ENST00000489485 GLRX3O76003 335 aaKnown RBP17.35■□□□□ 0.37
CLDN11-209ENST00000489485 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
CLDN11-209ENST00000489485 USP17L3A6NCW0 530 aa17.34■□□□□ 0.37
CLDN11-209ENST00000489485 USP17L4A6NCW7 530 aa17.34■□□□□ 0.37
CLDN11-209ENST00000489485 FZD9O00144 591 aa17.34■□□□□ 0.37
CLDN11-209ENST00000489485 COL1A1P02452 1464 aaPredicted RBP17.34■□□□□ 0.37
CLDN11-209ENST00000489485 USP17L1Q7RTZ2 530 aa17.34■□□□□ 0.37
CLDN11-209ENST00000489485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.34■□□□□ 0.37
CLDN11-209ENST00000489485 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.37
CLDN11-209ENST00000489485 ZAP70P43403 619 aa17.33■□□□□ 0.37
CLDN11-209ENST00000489485 CXCL9Q07325 125 aa17.33■□□□□ 0.37
CLDN11-209ENST00000489485 PSMD14O00487 310 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 STRIP1Q5VSL9 837 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 WDR66Q8TBY9 1149 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 HAUS7Q99871 368 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 PSME4Q14997 1843 aa17.33■□□□□ 0.36
CLDN11-209ENST00000489485 AOX1Q06278 1338 aa17.32■□□□□ 0.36
CLDN11-209ENST00000489485 FAM205AQ6ZU69 1335 aa17.32■□□□□ 0.36
CLDN11-209ENST00000489485 TBC1D9Q6ZT07 1266 aa17.32■□□□□ 0.36
CLDN11-209ENST00000489485 MXD3Q9BW11 206 aa17.32■□□□□ 0.36
CLDN11-209ENST00000489485 GJA3Q9Y6H8 435 aa17.32■□□□□ 0.36
CLDN11-209ENST00000489485 GOLIM4O00461 696 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 CYP2E1P05181 493 aaPredicted RBP17.31■□□□□ 0.36
CLDN11-209ENST00000489485 TNIP1Q15025 636 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
CLDN11-209ENST00000489485 PAG1Q9NWQ8 432 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 PDS5AQ29RF7 1337 aaKnown RBP17.31■□□□□ 0.36
CLDN11-209ENST00000489485 ZNF541Q9H0D2 1346 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
CLDN11-209ENST00000489485 DACT2Q5SW24 774 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 TBC1D22AQ8WUA7 517 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
CLDN11-209ENST00000489485 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
CLDN11-209ENST00000489485 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
CLDN11-209ENST00000489485 ZBTB22O15209 634 aa17.3■□□□□ 0.36
CLDN11-209ENST00000489485 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
CLDN11-209ENST00000489485 ZNF646O15015 1829 aaPredicted RBP17.29■□□□□ 0.36
CLDN11-209ENST00000489485 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
CLDN11-209ENST00000489485 TTF1Q15361 905 aaPredicted RBP17.29■□□□□ 0.36
CLDN11-209ENST00000489485 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
CLDN11-209ENST00000489485 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
CLDN11-209ENST00000489485 LRP2BPQ9P2M1 347 aa17.29■□□□□ 0.36
CLDN11-209ENST00000489485 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
CLDN11-209ENST00000489485 BMP2KLQ5H9B9 411 aa17.29■□□□□ 0.36
CLDN11-209ENST00000489485 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
CLDN11-209ENST00000489485 CERS5Q8N5B7 392 aa17.29■□□□□ 0.36
CLDN11-209ENST00000489485 RILPL2Q969X0 211 aa17.29■□□□□ 0.36
CLDN11-209ENST00000489485 SALL1Q9NSC2 1324 aa17.28■□□□□ 0.36
CLDN11-209ENST00000489485 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
CLDN11-209ENST00000489485 IDH1O75874 414 aaKnown RBP17.28■□□□□ 0.36
CLDN11-209ENST00000489485 PRDX5P30044 214 aa17.28■□□□□ 0.36
CLDN11-209ENST00000489485 KIAA0825Q8IV33 1275 aa17.28■□□□□ 0.36
CLDN11-209ENST00000489485 GPC2Q8N158 579 aa17.28■□□□□ 0.36
CLDN11-209ENST00000489485 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
CLDN11-209ENST00000489485 AK9Q5TCS8 1911 aa17.28■□□□□ 0.36
CLDN11-209ENST00000489485 MYO3BQ8WXR4 1341 aa17.27■□□□□ 0.36
CLDN11-209ENST00000489485 DDNO94850 711 aaPredicted RBP17.27■□□□□ 0.36
CLDN11-209ENST00000489485 LDHBP07195 334 aaKnown RBP17.27■□□□□ 0.36
CLDN11-209ENST00000489485 GRIK5Q16478 980 aa17.27■□□□□ 0.36
CLDN11-209ENST00000489485 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.36
CLDN11-209ENST00000489485 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.36
CLDN11-209ENST00000489485 RAI14Q9P0K7 980 aa17.27■□□□□ 0.36
CLDN11-209ENST00000489485 SDSP20132 328 aa17.27■□□□□ 0.35
CLDN11-209ENST00000489485 FKBP1AP62942 108 aaKnown RBP17.27■□□□□ 0.35
CLDN11-209ENST00000489485 CNTROBQ8N137 903 aa17.27■□□□□ 0.35
CLDN11-209ENST00000489485 AGBL3Q8NEM8 1001 aa17.26■□□□□ 0.35
CLDN11-209ENST00000489485 EVI5LQ96CN4 794 aa17.26■□□□□ 0.35
CLDN11-209ENST00000489485 FSD1Q9BTV5 496 aa17.26■□□□□ 0.35
CLDN11-209ENST00000489485 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
CLDN11-209ENST00000489485 GMPSP49915 693 aaPredicted RBP17.25■□□□□ 0.35
CLDN11-209ENST00000489485 MAP3K12Q12852 859 aa17.25■□□□□ 0.35
CLDN11-209ENST00000489485 DZIP1Q86YF9 867 aaKnown RBP17.25■□□□□ 0.35
CLDN11-209ENST00000489485 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
CLDN11-209ENST00000489485 RPS12P25398 132 aaKnown RBP17.24■□□□□ 0.35
CLDN11-209ENST00000489485 OGFOD1Q8N543 542 aa17.24■□□□□ 0.35
CLDN11-209ENST00000489485 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms