RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 RTL9Q8NET4 1388 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 TCHHQ07283 1943 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 RREB1Q92766 1687 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 ESPNB1AK53 854 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 M0R2C6 588 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 PTMAP06454 111 aaKnown RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 ARID4AP29374 1257 aaPredicted RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 ZAP70P43403 619 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 UBE3CQ15386 1083 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 IMMTQ16891 758 aaKnown RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 LPIN2Q92539 896 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 BRF1Q92994 677 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 UBN2Q6ZU65 1347 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 LOC102724428A0A0B4J2F2 783 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 FIBPO43427 364 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 SIK1P57059 783 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 PUM3Q15397 648 aaKnown RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 WASHC4Q2M389 1173 aa10.42□□□□□ -0.74
CSMD2-209ENST00000489419 FAM43BQ6ZT52 329 aaPredicted RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 MARCH10Q8NA82 808 aaPredicted RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 CCDC85AQ96PX6 553 aaPredicted RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 UTP14AQ9BVJ6 771 aaKnown RBP10.42□□□□□ -0.74
CSMD2-209ENST00000489419 NWD2Q9ULI1 1742 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 ATRNO75882 1429 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 FGFR2P21802 821 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 CRKLP46109 303 aaKnown RBP10.41□□□□□ -0.74
CSMD2-209ENST00000489419 DMTNQ08495 405 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 SCARF1Q14162 830 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 ATL3Q6DD88 541 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 NAA16Q6N069 864 aaPredicted RBP10.41□□□□□ -0.74
CSMD2-209ENST00000489419 CDC37L1Q7L3B6 337 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 ZNF592Q92610 1267 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 LRP5O75197 1615 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 PHLPP1O60346 1717 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 ADD2P35612 726 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 MCAMP43121 646 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 SCRN1Q12765 414 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 STK3Q13188 491 aa10.41□□□□□ -0.74
CSMD2-209ENST00000489419 SLIT2O94813 1529 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 CAMTA2O94983 1202 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 CLSTN1O94985 981 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 FGAP02671 866 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 SLFNL1Q499Z3 407 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 SUSD4Q5VX71 490 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 CLEC4GQ6UXB4 293 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 ZNF831Q5JPB2 1677 aa10.4□□□□□ -0.74
CSMD2-209ENST00000489419 SLC5A1P13866 664 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 CCDC152Q4G0S7 254 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 CCDC102BQ68D86 513 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 NSUN7Q8NE18 718 aaKnown RBP10.39□□□□□ -0.75
CSMD2-209ENST00000489419 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 H3BQV1 296 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 FOXP2O15409 715 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 GPAA1O43292 621 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 PDIA3P30101 505 aaKnown RBP10.39□□□□□ -0.75
CSMD2-209ENST00000489419 MCM5P33992 734 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 PSEN1P49768 467 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 RESTQ13127 1097 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 ALX1Q15699 326 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 PUS7LQ9H0K6 701 aaKnown RBP10.39□□□□□ -0.75
CSMD2-209ENST00000489419 CFAP45Q9UL16 551 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 AKAP11Q9UKA4 1901 aa10.39□□□□□ -0.75
CSMD2-209ENST00000489419 MYH7P12883 1935 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 PATL2C9JE40 543 aaKnown RBP10.38□□□□□ -0.75
CSMD2-209ENST00000489419 ZNF213O14771 459 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 DHX16O60231 1041 aaKnown RBP10.38□□□□□ -0.75
CSMD2-209ENST00000489419 JAK2O60674 1132 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 APOBRQ0VD83 1088 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 ZNF622Q969S3 477 aaKnown RBP eCLIP10.38□□□□□ -0.75
CSMD2-209ENST00000489419 MAP7D2Q96T17 732 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 ZMYM6O95789 1325 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 SALL1Q9NSC2 1324 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 TOM1O60784 492 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 ITPK1Q13572 414 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 SLC9C2Q5TAH2 1124 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 ZSCAN30Q86W11 494 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 MB21D2Q8IYB1 491 aaPredicted RBP10.38□□□□□ -0.75
CSMD2-209ENST00000489419 SPATA32Q96LK8 384 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 MPHOSPH8Q99549 860 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
CSMD2-209ENST00000489419 CTDNEP1O95476 244 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 NTSR2O95665 410 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 MYCNP04198 464 aaPredicted RBP10.37□□□□□ -0.75
CSMD2-209ENST00000489419 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 FERMT3Q86UX7 667 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 LEO1Q8WVC0 666 aaPredicted RBP10.37□□□□□ -0.75
CSMD2-209ENST00000489419 PLCD4Q9BRC7 762 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 LRRC2Q9BYS8 371 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 PTPDC1A2A3K4 754 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 GOLGA6L4A6NEF3 574 aa10.37□□□□□ -0.75
CSMD2-209ENST00000489419 IGHMBP2P38935 993 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms