RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 AKTIPQ9H8T0 292 aa4.79□□□□□ -1.64
CALD1-221ENST00000489019 SEC31BQ9NQW1 1179 aa4.79□□□□□ -1.64
CALD1-221ENST00000489019 DCTN4Q9UJW0 460 aa4.79□□□□□ -1.64
CALD1-221ENST00000489019 DCAF1Q9Y4B6 1507 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 FAM177BA6PVY3 158 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 MAPK1P28482 360 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 CABP4P57796 275 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 PIP4K2BP78356 416 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 KIAA0319Q5VV43 1072 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 FAM117BQ6P1L5 589 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 Q6ZS46 218 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 DZIP1LQ8IYY4 767 aaKnown RBP4.78□□□□□ -1.64
CALD1-221ENST00000489019 UBASH3BQ8TF42 649 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 TP53INP1Q96A56 240 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 CCDC74AQ96AQ1 378 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 CSRNP1Q96S65 589 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 SEMA6BQ9H3T3 888 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 LIN7BQ9HAP6 207 aa4.78□□□□□ -1.64
CALD1-221ENST00000489019 A0A096LPE4 126 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 A0A1W2PPZ6 126 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 DYRK3O43781 588 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 NEFLP07196 543 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 ESRRAP11474 423 aaPredicted RBP4.77□□□□□ -1.65
CALD1-221ENST00000489019 NLRP12P59046 1061 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 IKBKEQ14164 716 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 DSC3Q14574 896 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 SPRED3Q2MJR0 410 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 KIAA1211Q6ZU35 1233 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 ACAD11Q709F0 780 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 HOMEZQ8IX15 550 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 EPS8L3Q8TE67 593 aaKnown RBP4.77□□□□□ -1.65
CALD1-221ENST00000489019 DCAF11Q8TEB1 546 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 WNT8BQ93098 351 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 DNAJC25Q9H1X3 360 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 OSGEPQ9NPF4 335 aa4.77□□□□□ -1.65
CALD1-221ENST00000489019 TREHO43280 583 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 C19orf57Q0VDD7 668 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 DUOXA2Q1HG44 320 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 ZNF423Q2M1K9 1284 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 PI16Q6UXB8 463 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 GLIS3Q8NEA6 775 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 UBL7Q96S82 380 aaPredicted RBP4.76□□□□□ -1.65
CALD1-221ENST00000489019 ABCB6Q9NP58 842 aa4.76□□□□□ -1.65
CALD1-221ENST00000489019 DLGAP3O95886 979 aa4.75□□□□□ -1.65
CALD1-221ENST00000489019 H2AFB1P0C5Y9 115 aa4.75□□□□□ -1.65
CALD1-221ENST00000489019 H2AFB2P0C5Z0 115 aa4.75□□□□□ -1.65
CALD1-221ENST00000489019 GLB1P16278 677 aa4.75□□□□□ -1.65
CALD1-221ENST00000489019 NRSN2Q9GZP1 204 aa4.75□□□□□ -1.65
CALD1-221ENST00000489019 EHD4Q9H223 541 aa4.75□□□□□ -1.65
CALD1-221ENST00000489019 CLEC4MQ9H2X3 399 aaPredicted RBP4.75□□□□□ -1.65
CALD1-221ENST00000489019 PNMA6FA0A0J9YX94 578 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 GADD45BO75293 160 aaPredicted RBP4.74□□□□□ -1.65
CALD1-221ENST00000489019 ITPKAP23677 461 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 ARL4DP49703 201 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 PCDH1Q08174 1060 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 GRM2Q14416 872 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 ENOX2Q16206 610 aaKnown RBP4.74□□□□□ -1.65
CALD1-221ENST00000489019 PRSS36Q5K4E3 855 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 AEBP1Q8IUX7 1158 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 ARMC10Q8N2F6 343 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 SETDB2Q96T68 719 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 ZNF576Q9H609 170 aa4.74□□□□□ -1.65
CALD1-221ENST00000489019 SOX17Q9H6I2 414 aaPredicted RBP4.74□□□□□ -1.65
CALD1-221ENST00000489019 LOC100289279A0A1B0GTE1 492 aa4.73□□□□□ -1.65
CALD1-221ENST00000489019 PDIA4P13667 645 aaKnown RBP4.73□□□□□ -1.65
CALD1-221ENST00000489019 PLCB3Q01970 1234 aa4.73□□□□□ -1.65
CALD1-221ENST00000489019 GSTM4Q03013 218 aa4.73□□□□□ -1.65
CALD1-221ENST00000489019 FMR1Q06787 632 aaKnown RBP eCLIP4.73□□□□□ -1.65
CALD1-221ENST00000489019 PRPF40BQ6NWY9 871 aaKnown RBP4.73□□□□□ -1.65
CALD1-221ENST00000489019 PRR23CQ6ZRP0 262 aa4.73□□□□□ -1.65
CALD1-221ENST00000489019 ASB16Q96NS5 453 aa4.73□□□□□ -1.65
CALD1-221ENST00000489019 TMEM238LA0A1B0GVL6 79 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 ECEL1O95672 775 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 B3GALT4O96024 378 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 CTSBP07858 339 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 MAPK8P45983 427 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 PREPP48147 710 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 FAAP100Q0VG06 881 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
CALD1-221ENST00000489019 FAM46AQ96IP4 442 aaKnown RBP4.72□□□□□ -1.65
CALD1-221ENST00000489019 TRIM56Q9BRZ2 755 aaKnown RBP4.72□□□□□ -1.65
CALD1-221ENST00000489019 RUSC1Q9BVN2 902 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 USP26Q9BXU7 913 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 TMPRSS13Q9BYE2 586 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 RNF208Q9H0X6 261 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 WWC3Q9ULE0 1092 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 ABCC9O60706 1549 aa4.72□□□□□ -1.65
CALD1-221ENST00000489019 MEGF11A6BM72 1044 aa4.71□□□□□ -1.66
CALD1-221ENST00000489019 PATL2C9JE40 543 aaKnown RBP4.71□□□□□ -1.66
CALD1-221ENST00000489019 PTPN12Q05209 780 aaKnown RBP4.71□□□□□ -1.66
CALD1-221ENST00000489019 ZSCAN29Q8IWY8 852 aaPredicted RBP4.71□□□□□ -1.66
CALD1-221ENST00000489019 BCO2Q9BYV7 579 aa4.71□□□□□ -1.66
CALD1-221ENST00000489019 CEP41Q9BYV8 373 aa4.71□□□□□ -1.66
CALD1-221ENST00000489019 NLRP2Q9NX02 1062 aa4.71□□□□□ -1.66
CALD1-221ENST00000489019 TIAF1O95411 115 aa4.7□□□□□ -1.66
CALD1-221ENST00000489019 P4HBP07237 508 aaKnown RBP4.7□□□□□ -1.66
CALD1-221ENST00000489019 MAOBP27338 520 aa4.7□□□□□ -1.66
CALD1-221ENST00000489019 ZNF157P51786 506 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms