RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TSEN2Q8NCE0 465 aaKnown RBP5.16□□□□□ -1.58
PRPF4-203ENST00000488937 CHMP7Q8WUX9 453 aaPredicted RBP5.16□□□□□ -1.58
PRPF4-203ENST00000488937 SCG3Q8WXD2 468 aaKnown RBP5.16□□□□□ -1.58
PRPF4-203ENST00000488937 MRRFQ96E11 262 aaKnown RBP5.16□□□□□ -1.58
PRPF4-203ENST00000488937 C8orf37Q96NL8 207 aa5.16□□□□□ -1.58
PRPF4-203ENST00000488937 CYP26A1O43174 497 aa5.15□□□□□ -1.59
PRPF4-203ENST00000488937 SART1O43290 800 aaKnown RBP5.15□□□□□ -1.59
PRPF4-203ENST00000488937 C21orf2O43822 256 aa5.15□□□□□ -1.59
PRPF4-203ENST00000488937 SASH3O75995 380 aa5.15□□□□□ -1.59
PRPF4-203ENST00000488937 EGFRP00533 1210 aa5.15□□□□□ -1.59
PRPF4-203ENST00000488937 CD68P34810 354 aaPredicted RBP5.15□□□□□ -1.59
PRPF4-203ENST00000488937 CRTC2Q53ET0 693 aaPredicted RBP5.15□□□□□ -1.59
PRPF4-203ENST00000488937 FBXL6Q8N531 539 aa5.15□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L15C9J2P7 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L10C9JJH3 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L13C9JLJ4 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L12C9JPN9 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L11C9JVI0 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L21D6R901 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L18D6R9N7 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L22D6RA61 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L17D6RBQ6 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L19D6RCP7 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L20D6RJB6 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 HOXA5P20719 270 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 RASA1P20936 1047 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 USP17L24Q0WX57 530 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 NOM1Q5C9Z4 860 aaKnown RBP5.14□□□□□ -1.59
PRPF4-203ENST00000488937 FAM117BQ6P1L5 589 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 KIAA1211Q6ZU35 1233 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 KLHL23Q8NBE8 558 aa5.14□□□□□ -1.59
PRPF4-203ENST00000488937 FAM177BA6PVY3 158 aa5.13□□□□□ -1.59
PRPF4-203ENST00000488937 SUV39H1O43463 412 aa5.13□□□□□ -1.59
PRPF4-203ENST00000488937 ZNF16P17020 682 aaPredicted RBP5.13□□□□□ -1.59
PRPF4-203ENST00000488937 ELOAQ14241 798 aaKnown RBP5.13□□□□□ -1.59
PRPF4-203ENST00000488937 ANKRD34AQ69YU3 496 aa5.13□□□□□ -1.59
PRPF4-203ENST00000488937 B4GALNT3Q6L9W6 998 aa5.13□□□□□ -1.59
PRPF4-203ENST00000488937 COL26A1Q96A83 441 aa5.13□□□□□ -1.59
PRPF4-203ENST00000488937 ZNF594Q96JF6 807 aaPredicted RBP5.13□□□□□ -1.59
PRPF4-203ENST00000488937 BCS1LQ9Y276 419 aa5.13□□□□□ -1.59
PRPF4-203ENST00000488937 MICAL2O94851 1124 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 TCF3P15923 654 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 IGFBP4P22692 258 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 VAMP1P23763 118 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 SEC13P55735 322 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 DUOXA2Q1HG44 320 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 LARP1Q6PKG0 1096 aaKnown RBP5.12□□□□□ -1.59
PRPF4-203ENST00000488937 ANKMY2Q8IV38 441 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 GALNT11Q8NCW6 608 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 SREK1Q8WXA9 508 aaKnown RBP5.12□□□□□ -1.59
PRPF4-203ENST00000488937 BORCS6Q96GS4 357 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 SPATA32Q96LK8 384 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 DRC1Q96MC2 740 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 CADPSQ9ULU8 1353 aa5.12□□□□□ -1.59
PRPF4-203ENST00000488937 J3QW42 95 aa5.11□□□□□ -1.59
PRPF4-203ENST00000488937 FOXD2O60548 495 aaPredicted RBP5.11□□□□□ -1.59
PRPF4-203ENST00000488937 XYLBO75191 536 aa5.11□□□□□ -1.59
PRPF4-203ENST00000488937 DPYDQ12882 1025 aa5.11□□□□□ -1.59
PRPF4-203ENST00000488937 PHLDB3Q6NSJ2 640 aa5.11□□□□□ -1.59
PRPF4-203ENST00000488937 NSUN5Q96P11 429 aaKnown RBP5.11□□□□□ -1.59
PRPF4-203ENST00000488937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.11□□□□□ -1.59
PRPF4-203ENST00000488937 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.11□□□□□ -1.59
PRPF4-203ENST00000488937 ZMIZ1Q9ULJ6 1067 aa5.11□□□□□ -1.59
PRPF4-203ENST00000488937 SLC5A6Q9Y289 635 aa5.11□□□□□ -1.59
PRPF4-203ENST00000488937 SMNDC1O75940 238 aaKnown RBP eCLIP5.1□□□□□ -1.59
PRPF4-203ENST00000488937 CDC27P30260 824 aa5.1□□□□□ -1.59
PRPF4-203ENST00000488937 DGKZQ13574 1117 aa5.1□□□□□ -1.59
PRPF4-203ENST00000488937 VTI1AQ96AJ9 217 aa5.1□□□□□ -1.59
PRPF4-203ENST00000488937 SPACA7Q96KW9 195 aa5.1□□□□□ -1.59
PRPF4-203ENST00000488937 TRIM33Q9UPN9 1127 aa5.1□□□□□ -1.59
PRPF4-203ENST00000488937 RTCBQ9Y3I0 505 aaKnown RBP5.1□□□□□ -1.59
PRPF4-203ENST00000488937 LINC01387J3KSC0 135 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 MAP4P27816 1152 aaKnown RBP5.09□□□□□ -1.59
PRPF4-203ENST00000488937 PREPP48147 710 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 C11orf91Q3C1V1 193 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 CDCA8Q53HL2 280 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 LSRQ86X29 649 aaPredicted RBP5.09□□□□□ -1.59
PRPF4-203ENST00000488937 BCL7CQ8WUZ0 217 aaPredicted RBP5.09□□□□□ -1.59
PRPF4-203ENST00000488937 HINFPQ9BQA5 517 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 RNF208Q9H0X6 261 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 RC3H2Q9HBD1 1191 aaKnown RBP5.09□□□□□ -1.59
PRPF4-203ENST00000488937 KLK14Q9P0G3 267 aa5.09□□□□□ -1.59
PRPF4-203ENST00000488937 NOVA2Q9UNW9 492 aaKnown RBP5.09□□□□□ -1.59
PRPF4-203ENST00000488937 GAS2O43903 313 aaKnown RBP5.08□□□□□ -1.6
PRPF4-203ENST00000488937 MMP20O60882 483 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 FAM69CQ0P6D2 419 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 FDX2Q6P4F2 183 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 MYO19Q96H55 970 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 ADAM19Q9H013 955 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 WDR26Q9H7D7 661 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 KCNK4Q9NYG8 393 aa5.08□□□□□ -1.6
PRPF4-203ENST00000488937 FSCN2O14926 492 aa5.07□□□□□ -1.6
PRPF4-203ENST00000488937 PPM1GO15355 546 aaPredicted RBP5.07□□□□□ -1.6
PRPF4-203ENST00000488937 FOXO3O43524 673 aa5.07□□□□□ -1.6
PRPF4-203ENST00000488937 SMARCA5O60264 1052 aaPredicted RBP5.07□□□□□ -1.6
PRPF4-203ENST00000488937 LGR5O75473 907 aa5.07□□□□□ -1.6
PRPF4-203ENST00000488937 MLANAQ16655 118 aa5.07□□□□□ -1.6
PRPF4-203ENST00000488937 SWI5Q1ZZU3 235 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms