RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 MAP3K11Q16584 847 aa24.26■■□□□ 1.47
GGPS1-206ENST00000488594 ZNF804AQ7Z570 1209 aa24.26■■□□□ 1.47
GGPS1-206ENST00000488594 SLC10A4Q96EP9 437 aa24.26■■□□□ 1.47
GGPS1-206ENST00000488594 FANCIQ9NVI1 1328 aa24.25■■□□□ 1.47
GGPS1-206ENST00000488594 PPP1R12BO60237 982 aaPredicted RBP24.25■■□□□ 1.47
GGPS1-206ENST00000488594 IL1R1P14778 569 aa24.25■■□□□ 1.47
GGPS1-206ENST00000488594 CERS5Q8N5B7 392 aa24.25■■□□□ 1.47
GGPS1-206ENST00000488594 TAF5LO75529 589 aa24.24■■□□□ 1.47
GGPS1-206ENST00000488594 ZBTB48P10074 688 aaPredicted RBP24.24■■□□□ 1.47
GGPS1-206ENST00000488594 SUPT20HL1Q3ZLR7 823 aa24.24■■□□□ 1.47
GGPS1-206ENST00000488594 FOXO4P98177 505 aa24.23■■□□□ 1.47
GGPS1-206ENST00000488594 CCDC184Q52MB2 194 aa24.23■■□□□ 1.47
GGPS1-206ENST00000488594 SPDYE2BA6NHP3 402 aa24.22■■□□□ 1.47
GGPS1-206ENST00000488594 VAMP4O75379 141 aa24.22■■□□□ 1.47
GGPS1-206ENST00000488594 SPDYE6P0CI01 402 aa24.22■■□□□ 1.47
GGPS1-206ENST00000488594 HELBQ8NG08 1087 aaPredicted RBP24.22■■□□□ 1.47
GGPS1-206ENST00000488594 CHMP3Q9Y3E7 222 aa24.22■■□□□ 1.47
GGPS1-206ENST00000488594 SNAP23O00161 211 aa24.21■■□□□ 1.47
GGPS1-206ENST00000488594 CFAP100Q494V2 611 aa24.21■■□□□ 1.47
GGPS1-206ENST00000488594 IFNL1Q8IU54 200 aa24.21■■□□□ 1.47
GGPS1-206ENST00000488594 WDR63Q8IWG1 891 aa24.21■■□□□ 1.47
GGPS1-206ENST00000488594 R3HDMLQ9H3Y0 253 aa24.21■■□□□ 1.47
GGPS1-206ENST00000488594 F8W031 263 aaPredicted RBP24.2■■□□□ 1.46
GGPS1-206ENST00000488594 CCDC57Q2TAC2 916 aa24.2■■□□□ 1.46
GGPS1-206ENST00000488594 BEND3Q5T5X7 828 aa24.2■■□□□ 1.46
GGPS1-206ENST00000488594 FZD1Q9UP38 647 aa24.2■■□□□ 1.46
GGPS1-206ENST00000488594 WNK4Q96J92 1243 aa24.19■■□□□ 1.46
GGPS1-206ENST00000488594 PRMT6Q96LA8 375 aaPredicted RBP24.19■■□□□ 1.46
GGPS1-206ENST00000488594 SSC5DA1L4H1 1573 aa24.19■■□□□ 1.46
GGPS1-206ENST00000488594 CACNA1FO60840 1977 aa24.18■■□□□ 1.46
GGPS1-206ENST00000488594 CLRN2A0PK11 232 aa24.18■■□□□ 1.46
GGPS1-206ENST00000488594 IREB2P48200 963 aaKnown RBP24.18■■□□□ 1.46
GGPS1-206ENST00000488594 TAF7LQ5H9L4 462 aa24.18■■□□□ 1.46
GGPS1-206ENST00000488594 LMBR1LQ6UX01 489 aa24.18■■□□□ 1.46
GGPS1-206ENST00000488594 LDHAL6AQ6ZMR3 332 aa24.18■■□□□ 1.46
GGPS1-206ENST00000488594 CLMNQ96JQ2 1002 aa24.18■■□□□ 1.46
GGPS1-206ENST00000488594 OTUD7BQ6GQQ9 843 aa24.17■■□□□ 1.46
GGPS1-206ENST00000488594 VEZTQ9HBM0 779 aa24.17■■□□□ 1.46
GGPS1-206ENST00000488594 PCDHAC2Q9Y5I4 1007 aa24.17■■□□□ 1.46
GGPS1-206ENST00000488594 F6X3S4 739 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 GRM8O00222 908 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 RBM5P52756 815 aaKnown RBP eCLIP24.16■■□□□ 1.46
GGPS1-206ENST00000488594 EXOSC9Q06265 439 aaKnown RBP24.16■■□□□ 1.46
GGPS1-206ENST00000488594 CNNM1Q9NRU3 951 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 TNFAIP1Q13829 316 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 RASA3Q14644 834 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 NBPF12Q5TAG4 269 aaPredicted RBP24.16■■□□□ 1.46
GGPS1-206ENST00000488594 ANKRD13AQ8IZ07 590 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 TRIM17Q9Y577 477 aa24.16■■□□□ 1.46
GGPS1-206ENST00000488594 FAM205AQ6ZU69 1335 aa24.15■■□□□ 1.46
GGPS1-206ENST00000488594 IGF2BP3O00425 579 aaKnown RBP eCLIP24.15■■□□□ 1.46
GGPS1-206ENST00000488594 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.15■■□□□ 1.46
GGPS1-206ENST00000488594 ECM29Q5VYK3 1845 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 PLIN1O60240 522 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 EPHA10Q5JZY3 1008 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 INTS3Q68E01 1043 aaKnown RBP24.14■■□□□ 1.45
GGPS1-206ENST00000488594 OTOP1Q7RTM1 612 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 ERO1AQ96HE7 468 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 MRS2Q9HD23 443 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 JAG2Q9Y219 1238 aa24.14■■□□□ 1.45
GGPS1-206ENST00000488594 USP2O75604 605 aaPredicted RBP24.13■■□□□ 1.45
GGPS1-206ENST00000488594 UBE4AQ14139 1066 aa24.13■■□□□ 1.45
GGPS1-206ENST00000488594 ZNF594Q96JF6 807 aaPredicted RBP24.13■■□□□ 1.45
GGPS1-206ENST00000488594 C9orf78Q9NZ63 289 aaPredicted RBP24.13■■□□□ 1.45
GGPS1-206ENST00000488594 SERPINA10Q9UK55 444 aa24.13■■□□□ 1.45
GGPS1-206ENST00000488594 A0A1B0GUL6 1792 aa24.12■■□□□ 1.45
GGPS1-206ENST00000488594 ALDH1L1O75891 902 aa24.12■■□□□ 1.45
GGPS1-206ENST00000488594 SPDYE2Q495Y8 402 aa24.12■■□□□ 1.45
GGPS1-206ENST00000488594 MFSD14BQ5SR56 506 aa24.12■■□□□ 1.45
GGPS1-206ENST00000488594 TDRD7Q8NHU6 1098 aaKnown RBP24.12■■□□□ 1.45
GGPS1-206ENST00000488594 TESPA1A2RU30 521 aaPredicted RBP24.11■■□□□ 1.45
GGPS1-206ENST00000488594 HIBADHP31937 336 aaKnown RBP24.11■■□□□ 1.45
GGPS1-206ENST00000488594 TTF2Q9UNY4 1162 aaKnown RBP24.11■■□□□ 1.45
GGPS1-206ENST00000488594 LAMB1P07942 1786 aa24.11■■□□□ 1.45
GGPS1-206ENST00000488594 AOX1Q06278 1338 aa24.1■■□□□ 1.45
GGPS1-206ENST00000488594 CRHR2Q13324 411 aa24.1■■□□□ 1.45
GGPS1-206ENST00000488594 ZNF70Q9UC06 446 aaPredicted RBP24.1■■□□□ 1.45
GGPS1-206ENST00000488594 SALL2Q9Y467 1007 aaPredicted RBP24.1■■□□□ 1.45
GGPS1-206ENST00000488594 GJA5P36382 358 aa24.09■■□□□ 1.45
GGPS1-206ENST00000488594 SRCIN1Q9C0H9 1055 aa24.08■■□□□ 1.45
GGPS1-206ENST00000488594 PTPN22Q9Y2R2 807 aa24.08■■□□□ 1.45
GGPS1-206ENST00000488594 GYG1P46976 350 aa24.07■■□□□ 1.44
GGPS1-206ENST00000488594 DZIP1LQ8IYY4 767 aaKnown RBP24.07■■□□□ 1.44
GGPS1-206ENST00000488594 GCC1Q96CN9 775 aa24.07■■□□□ 1.44
GGPS1-206ENST00000488594 OPTNQ96CV9 577 aa24.07■■□□□ 1.44
GGPS1-206ENST00000488594 FAM84BQ96KN1 310 aaPredicted RBP24.07■■□□□ 1.44
GGPS1-206ENST00000488594 TDRD3Q9H7E2 651 aaKnown RBP24.07■■□□□ 1.44
GGPS1-206ENST00000488594 MROH5Q6ZUA9 1318 aa24.06■■□□□ 1.44
GGPS1-206ENST00000488594 TNNI2P48788 182 aa24.06■■□□□ 1.44
GGPS1-206ENST00000488594 SP3Q02447 781 aa24.06■■□□□ 1.44
GGPS1-206ENST00000488594 SLC4A10Q6U841 1118 aa24.06■■□□□ 1.44
GGPS1-206ENST00000488594 PTPN18Q99952 460 aa24.06■■□□□ 1.44
GGPS1-206ENST00000488594 EFCC1Q9HA90 598 aa24.06■■□□□ 1.44
GGPS1-206ENST00000488594 CD99L2Q8TCZ2 262 aa24.05■■□□□ 1.44
GGPS1-206ENST00000488594 TEPSINQ96N21 525 aa24.05■■□□□ 1.44
GGPS1-206ENST00000488594 ELP3Q9H9T3 547 aa24.05■■□□□ 1.44
GGPS1-206ENST00000488594 CRKP46108 304 aa24.04■■□□□ 1.44
GGPS1-206ENST00000488594 VPS37DQ86XT2 251 aa24.04■■□□□ 1.44
GGPS1-206ENST00000488594 ARMC5Q96C12 935 aa24.04■■□□□ 1.44
GGPS1-206ENST00000488594 MS4A4AQ96JQ5 239 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms