RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 STK3Q13188 491 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 ERFEQ4G0M1 354 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 MEX3CQ5U5Q3 659 aaKnown RBP18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 WDR19Q8NEZ3 1342 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 ZNF274Q96GC6 653 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 BCL2L12Q9HB09 334 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 RBM27Q9P2N5 1060 aaKnown RBP18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 COL24A1Q17RW2 1714 aa18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 CHRNDQ07001 517 aa18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 SCRN1Q12765 414 aa18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 RASGRF1Q13972 1273 aa18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 FOXD4L6Q3SYB3 417 aaPredicted RBP18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 FOXD4L3Q6VB84 417 aaPredicted RBP18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 GDPD2Q9HCC8 539 aa18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 TCHHQ07283 1943 aa18.91■□□□□ 0.62
RAPGEF3-211ENST00000488250 ZNF532Q9HCE3 1301 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 GADD45BO75293 160 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 IDH1O75874 414 aaKnown RBP18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 UBE2HP62256 183 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 LRRC2Q9BYS8 371 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 ZMYM6O95789 1325 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 LY75O60449 1722 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 KLHL34Q8N239 644 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 NYXQ9GZU5 481 aa18.9■□□□□ 0.62
RAPGEF3-211ENST00000488250 MAP3K12Q12852 859 aa18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 ALX1Q15699 326 aa18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 TBC1D9BQ66K14 1250 aa18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 LRSAM1Q6UWE0 723 aa18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 CDC37L1Q7L3B6 337 aa18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 BSDC1Q9NW68 430 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
RAPGEF3-211ENST00000488250 MYO5AQ9Y4I1 1855 aaKnown RBP18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 ZNF213O14771 459 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 KCNQ4P56696 695 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 HMGN5P82970 282 aaKnown RBP18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 DNM1Q05193 864 aaKnown RBP18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 APOBRQ0VD83 1088 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 COL4A1P02462 1669 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 ZNF804BA4D1E1 1349 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 JAK2O60674 1132 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 MCM5P33992 734 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 NSUN7Q8NE18 718 aaKnown RBP18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 NCOA7Q8NI08 942 aa18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 STRBPQ96SI9 672 aaKnown RBP18.88■□□□□ 0.61
RAPGEF3-211ENST00000488250 SNAP23O00161 211 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 DTNBO60941 627 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 PHF14O94880 888 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 PDIA3P30101 505 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 UBE4AQ14139 1066 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 C3orf67Q6ZVT6 689 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 CASZ1Q86V15 1759 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 ELP1O95163 1332 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 SALL1Q9NSC2 1324 aa18.87■□□□□ 0.61
RAPGEF3-211ENST00000488250 HAND2P61296 217 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 KRT85P78386 507 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 RTCBQ9Y3I0 505 aaKnown RBP18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 GNPATO15228 680 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 FIBPO43427 364 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 CTDNEP1O95476 244 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 NASPP49321 788 aaPredicted RBP18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 BCAMP50895 628 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 AIDAQ96BJ3 306 aa18.86■□□□□ 0.61
RAPGEF3-211ENST00000488250 AFF2P51816 1311 aa18.85■□□□□ 0.61
RAPGEF3-211ENST00000488250 SBF2Q86WG5 1849 aa18.85■□□□□ 0.61
RAPGEF3-211ENST00000488250 SYCE3A1L190 88 aa18.85■□□□□ 0.61
RAPGEF3-211ENST00000488250 ZPR1O75312 459 aa18.85■□□□□ 0.61
RAPGEF3-211ENST00000488250 NAA16Q6N069 864 aaPredicted RBP18.85■□□□□ 0.61
RAPGEF3-211ENST00000488250 NBPF3Q9H094 633 aa18.85■□□□□ 0.61
RAPGEF3-211ENST00000488250 PATL2C9JE40 543 aaKnown RBP18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 PRC1O43663 620 aa18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 MAGEB6Q8N7X4 407 aa18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 ZSCAN16Q9H4T2 348 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 PNPLA7Q6ZV29 1317 aa18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 LETM1O95202 739 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 ANTXR2P58335 489 aa18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 SRP68Q9UHB9 627 aaKnown RBP18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 MINPP1Q9UNW1 487 aa18.84■□□□□ 0.61
RAPGEF3-211ENST00000488250 PTPDC1A2A3K4 754 aa18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 GNAT2P19087 354 aa18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 CCDC183Q5T5S1 534 aa18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 CHST3Q7LGC8 479 aa18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 SCAND2PQ9GZW5 306 aaPredicted RBP18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 RBSNQ9H1K0 784 aa18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 GNL3LQ9NVN8 582 aaKnown RBP18.83■□□□□ 0.6
RAPGEF3-211ENST00000488250 TRDNQ13061 729 aa18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 RESTQ13127 1097 aa18.82■□□□□ 0.6
RAPGEF3-211ENST00000488250 TPTE2Q6XPS3 522 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms