RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 DCAF8Q5TAQ9 597 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 FSD1Q9BTV5 496 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 SNED1Q8TER0 1413 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 GOLIM4O00461 696 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 KLRK1P26718 216 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 OLFM4Q6UX06 510 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 KBTBD3Q8NAB2 608 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 SYT17Q9BSW7 474 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 HMG20BQ9P0W2 317 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 ZAP70P43403 619 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 TXNRD3Q86VQ6 643 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 UTRNP46939 3433 aa12.79□□□□□ -0.36
HLA-DMB-261ENST00000487996 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 ZFYP08048 801 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 IL1R1P14778 569 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 KIAA2012Q0VF49 1180 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 SCARF1Q14162 830 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 C8orf34Q49A92 452 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 TDRD7Q8NHU6 1098 aaKnown RBP12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 SNRKQ9NRH2 765 aa12.78□□□□□ -0.36
HLA-DMB-261ENST00000487996 MAP3K12Q12852 859 aa12.77□□□□□ -0.36
HLA-DMB-261ENST00000487996 TBC1D9Q6ZT07 1266 aa12.77□□□□□ -0.36
HLA-DMB-261ENST00000487996 PODNQ7Z5L7 613 aa12.77□□□□□ -0.36
HLA-DMB-261ENST00000487996 SLC51AQ86UW1 340 aa12.77□□□□□ -0.36
HLA-DMB-261ENST00000487996 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.36
HLA-DMB-261ENST00000487996 TAOK3Q9H2K8 898 aa12.77□□□□□ -0.36
HLA-DMB-261ENST00000487996 LTBP3Q9NS15 1303 aa12.77□□□□□ -0.37
HLA-DMB-261ENST00000487996 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 PPIP5K2O43314 1243 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 GPR101Q96P66 508 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 BACH2Q9BYV9 841 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 SALL1Q9NSC2 1324 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 MYH7P12883 1935 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 CHMLP26374 656 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 PI16Q6UXB8 463 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 LRP2BPQ9P2M1 347 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 IQSEC3Q9UPP2 1182 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
HLA-DMB-261ENST00000487996 RAD50Q92878 1312 aa12.75□□□□□ -0.37
HLA-DMB-261ENST00000487996 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
HLA-DMB-261ENST00000487996 REC8O95072 547 aa12.75□□□□□ -0.37
HLA-DMB-261ENST00000487996 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
HLA-DMB-261ENST00000487996 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
HLA-DMB-261ENST00000487996 FAM205AQ6ZU69 1335 aa12.75□□□□□ -0.37
HLA-DMB-261ENST00000487996 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 AOC3Q16853 763 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 ANTXR1Q9H6X2 564 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 ABCF2Q9UG63 623 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 SUGT1Q9Y2Z0 365 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 COL1A1P02452 1464 aaPredicted RBP12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 CHD4Q14839 1912 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 MFAP1P55081 439 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 PIH1D3Q9NQM4 214 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-261ENST00000487996 ECE2O60344 883 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 DOK7Q18PE1 504 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 SLC9C2Q5TAH2 1124 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 CWC27Q6UX04 472 aaKnown RBP12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 JDP2Q8WYK2 163 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 ESYT1Q9BSJ8 1104 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 ZNF277Q9NRM2 450 aaPredicted RBP12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 HELLSQ9NRZ9 838 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
HLA-DMB-261ENST00000487996 EPB41L2O43491 1005 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 LDHBP07195 334 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 ADD2P35612 726 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 FKBP1AP62942 108 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 TTLL5Q6EMB2 1281 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 POTEHQ6S545 545 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 APPBP2Q92624 585 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 DBNDD1Q9H9R9 158 aa12.72□□□□□ -0.37
HLA-DMB-261ENST00000487996 MAST3O60307 1309 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms