RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 RARAP10276 462 aa9.12□□□□□ -0.95
CUL3-211ENST00000487558 WFDC8Q8IUA0 241 aa9.12□□□□□ -0.95
CUL3-211ENST00000487558 CRELD1Q96HD1 420 aa9.12□□□□□ -0.95
CUL3-211ENST00000487558 KRTAP9-6A0A140TA67 174 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 DEAF1O75398 565 aaPredicted RBP9.11□□□□□ -0.95
CUL3-211ENST00000487558 CES1P23141 567 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 ZNF76P36508 570 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 NRLP54845 237 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 LRP8Q14114 963 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 C9orf131Q5VYM1 1079 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 EPS8L3Q8TE67 593 aaKnown RBP9.11□□□□□ -0.95
CUL3-211ENST00000487558 SRCIN1Q9C0H9 1055 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
CUL3-211ENST00000487558 NOS3P29474 1203 aa9.1□□□□□ -0.95
CUL3-211ENST00000487558 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
CUL3-211ENST00000487558 IGF2-ASQ6U949 168 aa9.1□□□□□ -0.95
CUL3-211ENST00000487558 GALNT12Q8IXK2 581 aa9.1□□□□□ -0.95
CUL3-211ENST00000487558 C1orf127Q8N9H9 656 aa9.1□□□□□ -0.95
CUL3-211ENST00000487558 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
CUL3-211ENST00000487558 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
CUL3-211ENST00000487558 CNTN3Q9P232 1028 aa9.1□□□□□ -0.95
CUL3-211ENST00000487558 GADD45BO75293 160 aaPredicted RBP9.09□□□□□ -0.95
CUL3-211ENST00000487558 FANCCQ00597 558 aa9.09□□□□□ -0.95
CUL3-211ENST00000487558 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
CUL3-211ENST00000487558 SMG9Q9H0W8 520 aaKnown RBP9.09□□□□□ -0.95
CUL3-211ENST00000487558 CHRDQ9H2X0 955 aa9.09□□□□□ -0.95
CUL3-211ENST00000487558 FAM8A1Q9UBU6 413 aa9.09□□□□□ -0.95
CUL3-211ENST00000487558 DLL1O00548 723 aa9.08□□□□□ -0.96
CUL3-211ENST00000487558 EREGO14944 169 aa9.08□□□□□ -0.96
CUL3-211ENST00000487558 HYAL3O43820 417 aaPredicted RBP9.08□□□□□ -0.96
CUL3-211ENST00000487558 POLR3DP05423 398 aaPredicted RBP9.08□□□□□ -0.96
CUL3-211ENST00000487558 PI16Q6UXB8 463 aa9.08□□□□□ -0.96
CUL3-211ENST00000487558 HFE2Q6ZVN8 426 aa9.08□□□□□ -0.96
CUL3-211ENST00000487558 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
CUL3-211ENST00000487558 OSBPL7Q9BZF2 842 aa9.08□□□□□ -0.96
CUL3-211ENST00000487558 NPHS2Q9NP85 383 aa9.08□□□□□ -0.96
CUL3-211ENST00000487558 CTSHP09668 335 aa9.07□□□□□ -0.96
CUL3-211ENST00000487558 NAALADL2Q58DX5 795 aa9.07□□□□□ -0.96
CUL3-211ENST00000487558 NBPF11Q86T75 865 aa9.07□□□□□ -0.96
CUL3-211ENST00000487558 MEGF10Q96KG7 1140 aa9.07□□□□□ -0.96
CUL3-211ENST00000487558 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
CUL3-211ENST00000487558 EDN3P14138 238 aa9.06□□□□□ -0.96
CUL3-211ENST00000487558 DRC1Q96MC2 740 aa9.06□□□□□ -0.96
CUL3-211ENST00000487558 BCO2Q9BYV7 579 aa9.06□□□□□ -0.96
CUL3-211ENST00000487558 TGIF2Q9GZN2 237 aa9.06□□□□□ -0.96
CUL3-211ENST00000487558 USP31Q70CQ4 1352 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 LOC102724428A0A0B4J2F2 783 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 SIK1P57059 783 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 TAF1CQ15572 869 aaPredicted RBP9.05□□□□□ -0.96
CUL3-211ENST00000487558 NXPE4Q6UWF7 544 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 OR13H1Q8NG92 308 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 SREK1Q8WXA9 508 aaKnown RBP9.05□□□□□ -0.96
CUL3-211ENST00000487558 PLD4Q96BZ4 506 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 TRAK1Q9UPV9 953 aa9.05□□□□□ -0.96
CUL3-211ENST00000487558 J3QW42 95 aa9.04□□□□□ -0.96
CUL3-211ENST00000487558 MMP20O60882 483 aa9.04□□□□□ -0.96
CUL3-211ENST00000487558 USP17L7P0C7H9 530 aa9.04□□□□□ -0.96
CUL3-211ENST00000487558 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
CUL3-211ENST00000487558 RAD51AP2Q09MP3 1159 aa9.04□□□□□ -0.96
CUL3-211ENST00000487558 KIAA0319Q5VV43 1072 aa9.04□□□□□ -0.96
CUL3-211ENST00000487558 DZIP1LQ8IYY4 767 aaKnown RBP9.04□□□□□ -0.96
CUL3-211ENST00000487558 CCSER2Q9H7U1 834 aa9.04□□□□□ -0.96
CUL3-211ENST00000487558 SHROOM4Q9ULL8 1493 aa9.03□□□□□ -0.96
CUL3-211ENST00000487558 PSAPP07602 524 aa9.03□□□□□ -0.96
CUL3-211ENST00000487558 ST13P50502 369 aaKnown RBP9.03□□□□□ -0.96
CUL3-211ENST00000487558 SF3A1Q15459 793 aaKnown RBP9.03□□□□□ -0.96
CUL3-211ENST00000487558 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
CUL3-211ENST00000487558 TMEM130Q8N3G9 435 aa9.03□□□□□ -0.96
CUL3-211ENST00000487558 EHD4Q9H223 541 aa9.03□□□□□ -0.96
CUL3-211ENST00000487558 RNF112Q9ULX5 631 aa9.03□□□□□ -0.96
CUL3-211ENST00000487558 CYP2E1P05181 493 aaPredicted RBP9.02□□□□□ -0.97
CUL3-211ENST00000487558 GSTT1P30711 240 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 SOX18P35713 384 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 GRM2Q14416 872 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 PRR23CQ6ZRP0 262 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 AKTIPQ9H8T0 292 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 SALL4Q9UJQ4 1053 aa9.02□□□□□ -0.97
CUL3-211ENST00000487558 A0A1W2PP55 124 aa9.01□□□□□ -0.97
CUL3-211ENST00000487558 HYAL2Q12891 473 aa9.01□□□□□ -0.97
CUL3-211ENST00000487558 GNL2Q13823 731 aaKnown RBP9.01□□□□□ -0.97
CUL3-211ENST00000487558 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
CUL3-211ENST00000487558 GGT7Q9UJ14 662 aa9.01□□□□□ -0.97
CUL3-211ENST00000487558 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.01□□□□□ -0.97
CUL3-211ENST00000487558 F8W735 103 aaPredicted RBP9□□□□□ -0.97
CUL3-211ENST00000487558 PTPN12Q05209 780 aaKnown RBP9□□□□□ -0.97
CUL3-211ENST00000487558 ZNF654Q8IZM8 581 aa9□□□□□ -0.97
CUL3-211ENST00000487558 IL22RA1Q8N6P7 574 aa9□□□□□ -0.97
CUL3-211ENST00000487558 NSUN5Q96P11 429 aaKnown RBP9□□□□□ -0.97
CUL3-211ENST00000487558 MRPL18Q9H0U6 180 aaKnown RBP9□□□□□ -0.97
CUL3-211ENST00000487558 SRA1Q9HD15 236 aaKnown RBP9□□□□□ -0.97
CUL3-211ENST00000487558 ALX3O95076 343 aa8.99□□□□□ -0.97
CUL3-211ENST00000487558 GHRHP01286 108 aa8.99□□□□□ -0.97
CUL3-211ENST00000487558 XRCC5P13010 732 aaKnown RBP8.99□□□□□ -0.97
CUL3-211ENST00000487558 SETDB1Q15047 1291 aa8.99□□□□□ -0.97
CUL3-211ENST00000487558 MEI1Q5TIA1 1274 aa8.99□□□□□ -0.97
CUL3-211ENST00000487558 GDF6Q6KF10 455 aaPredicted RBP8.99□□□□□ -0.97
CUL3-211ENST00000487558 USP48Q86UV5 1035 aa8.99□□□□□ -0.97
CUL3-211ENST00000487558 DDX41Q9UJV9 622 aaKnown RBP8.99□□□□□ -0.97
CUL3-211ENST00000487558 PEAR1Q5VY43 1037 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms