RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SULF1Q8IWU6 871 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 CERS5Q8N5B7 392 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 TBC1D22AQ8WUA7 517 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 FBXW7Q969H0 707 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 CLUAP1Q96AJ1 413 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 PAPPA2Q9BXP8 1791 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 CELF2O95319 508 aaKnown RBP12.77□□□□□ -0.37
RNF220-215ENST00000487332 SCARF1Q14162 830 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
RNF220-215ENST00000487332 ANGEL2Q5VTE6 544 aaKnown RBP12.77□□□□□ -0.37
RNF220-215ENST00000487332 VPS37DQ86XT2 251 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 MXD3Q9BW11 206 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.37
RNF220-215ENST00000487332 ECE1P42892 770 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 FKBP1BP68106 108 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 DEFB115Q30KQ5 88 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 MFSD14BQ5SR56 506 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
RNF220-215ENST00000487332 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
RNF220-215ENST00000487332 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
RNF220-215ENST00000487332 PPP2R3BQ9Y5P8 575 aa12.76□□□□□ -0.37
RNF220-215ENST00000487332 PDS5AQ29RF7 1337 aaKnown RBP12.76□□□□□ -0.37
RNF220-215ENST00000487332 ADM5C9JUS6 153 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 SEMA3EO15041 775 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 ZBTB7BO15156 539 aaPredicted RBP12.75□□□□□ -0.37
RNF220-215ENST00000487332 MAST3O60307 1309 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 ASTN2O75129 1339 aaPredicted RBP12.75□□□□□ -0.37
RNF220-215ENST00000487332 RLBP1P12271 317 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 HDLBPQ00341 1268 aaKnown RBP12.75□□□□□ -0.37
RNF220-215ENST00000487332 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
RNF220-215ENST00000487332 POLA2Q14181 598 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 NBPF9Q3BBW0 867 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 SIL1Q9H173 461 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 SERPINA10Q9UK55 444 aa12.75□□□□□ -0.37
RNF220-215ENST00000487332 PA2G4Q9UQ80 394 aaKnown RBP12.75□□□□□ -0.37
RNF220-215ENST00000487332 WDR33Q9C0J8 1336 aaKnown RBP12.74□□□□□ -0.37
RNF220-215ENST00000487332 SALL1Q9NSC2 1324 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 VEGFBP49765 207 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 SSH3Q8TE77 659 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 MRIQ9BWK5 157 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
RNF220-215ENST00000487332 RCAN3Q9UKA8 241 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 AKAP2Q9Y2D5 859 aa12.74□□□□□ -0.37
RNF220-215ENST00000487332 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
RNF220-215ENST00000487332 MYO1BO43795 1136 aa12.73□□□□□ -0.37
RNF220-215ENST00000487332 CFAP100Q494V2 611 aa12.73□□□□□ -0.37
RNF220-215ENST00000487332 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
RNF220-215ENST00000487332 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
RNF220-215ENST00000487332 BCAMP50895 628 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 ATP8B2P98198 1209 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 WDR66Q8TBY9 1149 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
RNF220-215ENST00000487332 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
RNF220-215ENST00000487332 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
RNF220-215ENST00000487332 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
RNF220-215ENST00000487332 FRAT2O75474 233 aaPredicted RBP12.71□□□□□ -0.37
RNF220-215ENST00000487332 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
RNF220-215ENST00000487332 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
RNF220-215ENST00000487332 MAP2K2P36507 400 aa12.71□□□□□ -0.37
RNF220-215ENST00000487332 TNFAIP1Q13829 316 aa12.71□□□□□ -0.37
RNF220-215ENST00000487332 MVPQ14764 893 aaKnown RBP12.71□□□□□ -0.37
RNF220-215ENST00000487332 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
RNF220-215ENST00000487332 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
RNF220-215ENST00000487332 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
RNF220-215ENST00000487332 DENND2AQ9ULE3 1009 aa12.71□□□□□ -0.37
RNF220-215ENST00000487332 NOP58Q9Y2X3 529 aaKnown RBP12.71□□□□□ -0.37
RNF220-215ENST00000487332 NF2P35240 595 aa12.7□□□□□ -0.38
RNF220-215ENST00000487332 CRKP46108 304 aa12.7□□□□□ -0.38
RNF220-215ENST00000487332 HUNKP57058 714 aa12.7□□□□□ -0.38
RNF220-215ENST00000487332 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
RNF220-215ENST00000487332 G3BP1Q13283 466 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF220-215ENST00000487332 PDE3AQ14432 1141 aa12.7□□□□□ -0.38
RNF220-215ENST00000487332 CEP85Q6P2H3 762 aa12.7□□□□□ -0.38
RNF220-215ENST00000487332 ZGPATQ8N5A5 531 aaKnown RBP12.7□□□□□ -0.38
RNF220-215ENST00000487332 JAG2Q9Y219 1238 aa12.7□□□□□ -0.38
RNF220-215ENST00000487332 RPAP1Q9BWH6 1393 aaPredicted RBP12.69□□□□□ -0.38
RNF220-215ENST00000487332 SSC5DA1L4H1 1573 aa12.69□□□□□ -0.38
RNF220-215ENST00000487332 UNCXA6NJT0 531 aa12.69□□□□□ -0.38
RNF220-215ENST00000487332 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
RNF220-215ENST00000487332 IGSF3O75054 1194 aa12.69□□□□□ -0.38
RNF220-215ENST00000487332 PHKA1P46020 1223 aa12.69□□□□□ -0.38
RNF220-215ENST00000487332 TFCP2Q12800 502 aa12.69□□□□□ -0.38
RNF220-215ENST00000487332 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
RNF220-215ENST00000487332 NOGQ13253 232 aa12.69□□□□□ -0.38
RNF220-215ENST00000487332 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms