RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PSMC4P43686 418 aa16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 COPS6Q7L5N1 327 aa16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 KIAA0825Q8IV33 1275 aa16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 UBE2OQ9C0C9 1292 aaKnown RBP16.12■□□□□ 0.17
ATPAF1-205ENST00000487193 HTATSF1O43719 755 aaKnown RBP16.11■□□□□ 0.17
ATPAF1-205ENST00000487193 OSBPP22059 807 aa16.11■□□□□ 0.17
ATPAF1-205ENST00000487193 MAGEA10P43363 369 aaPredicted RBP16.11■□□□□ 0.17
ATPAF1-205ENST00000487193 GTF2A2P52657 109 aa16.11■□□□□ 0.17
ATPAF1-205ENST00000487193 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
ATPAF1-205ENST00000487193 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
ATPAF1-205ENST00000487193 TMEM265A0A087WTH1 108 aa16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 FMNL1O95466 1100 aaPredicted RBP16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 HOXD10P28358 340 aa16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 XAGE3Q8WTP9 111 aa16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 MYO3BQ8WXR4 1341 aa16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
ATPAF1-205ENST00000487193 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
ATPAF1-205ENST00000487193 TNFRSF10AO00220 468 aa16.09■□□□□ 0.17
ATPAF1-205ENST00000487193 MAFAQ8NHW3 353 aaPredicted RBP16.09■□□□□ 0.17
ATPAF1-205ENST00000487193 ZBED3Q96IU2 234 aaPredicted RBP16.09■□□□□ 0.17
ATPAF1-205ENST00000487193 MYPNQ86TC9 1320 aa16.09■□□□□ 0.17
ATPAF1-205ENST00000487193 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 ATP2B4P23634 1241 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 DLGAP5Q15398 846 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 STRIP1Q5VSL9 837 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 CPA4Q9UI42 421 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 PCDHAC2Q9Y5I4 1007 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 PPP2R3BQ9Y5P8 575 aa16.08■□□□□ 0.16
ATPAF1-205ENST00000487193 IRS4O14654 1257 aaPredicted RBP16.07■□□□□ 0.16
ATPAF1-205ENST00000487193 TTLL5Q6EMB2 1281 aa16.07■□□□□ 0.16
ATPAF1-205ENST00000487193 DIS3LQ8TF46 1054 aaKnown RBP16.07■□□□□ 0.16
ATPAF1-205ENST00000487193 DEFB118Q96PH6 123 aa16.07■□□□□ 0.16
ATPAF1-205ENST00000487193 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
ATPAF1-205ENST00000487193 XDHP47989 1333 aa16.07■□□□□ 0.16
ATPAF1-205ENST00000487193 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
ATPAF1-205ENST00000487193 ATP5J2-PTCD1G3V325 749 aa16.06■□□□□ 0.16
ATPAF1-205ENST00000487193 MMP14P50281 582 aa16.06■□□□□ 0.16
ATPAF1-205ENST00000487193 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
ATPAF1-205ENST00000487193 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
ATPAF1-205ENST00000487193 BTBD19C9JJ37 291 aa16.05■□□□□ 0.16
ATPAF1-205ENST00000487193 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
ATPAF1-205ENST00000487193 CDX2Q99626 313 aaPredicted RBP16.05■□□□□ 0.16
ATPAF1-205ENST00000487193 PRUNE2Q8WUY3 3088 aa16.05■□□□□ 0.16
ATPAF1-205ENST00000487193 ZNF804BA4D1E1 1349 aa16.04■□□□□ 0.16
ATPAF1-205ENST00000487193 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-205ENST00000487193 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
ATPAF1-205ENST00000487193 PRKCZQ05513 592 aa16.04■□□□□ 0.16
ATPAF1-205ENST00000487193 C17orf99Q6UX52 265 aa16.04■□□□□ 0.16
ATPAF1-205ENST00000487193 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.04■□□□□ 0.16
ATPAF1-205ENST00000487193 GTF2IP78347 998 aa16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 RASA3Q14644 834 aa16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 SLAIN1Q8ND83 568 aa16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 HELBQ8NG08 1087 aaPredicted RBP16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 GABRQQ9UN88 632 aa16.03■□□□□ 0.16
ATPAF1-205ENST00000487193 MYO1BO43795 1136 aa16.02■□□□□ 0.16
ATPAF1-205ENST00000487193 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.16
ATPAF1-205ENST00000487193 CETPP11597 493 aa16.02■□□□□ 0.16
ATPAF1-205ENST00000487193 VGLL4Q14135 290 aa16.02■□□□□ 0.16
ATPAF1-205ENST00000487193 COA1Q9GZY4 146 aa16.02■□□□□ 0.16
ATPAF1-205ENST00000487193 F8W031 263 aaPredicted RBP16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 ADCY3O60266 1144 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 ELNP15502 786 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 MAP3K9P80192 1104 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 TXNRD3Q86VQ6 643 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 ANKRD18AQ8IVF6 992 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 PRMT6Q96LA8 375 aaPredicted RBP16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 CSADQ9Y600 493 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
ATPAF1-205ENST00000487193 MED23Q9ULK4 1368 aa16■□□□□ 0.15
ATPAF1-205ENST00000487193 AOX1Q06278 1338 aa16■□□□□ 0.15
ATPAF1-205ENST00000487193 MUC3AQ02505 3323 aa16■□□□□ 0.15
ATPAF1-205ENST00000487193 INHAP05111 366 aa16■□□□□ 0.15
ATPAF1-205ENST00000487193 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
ATPAF1-205ENST00000487193 CFAP100Q494V2 611 aa16■□□□□ 0.15
ATPAF1-205ENST00000487193 NUDCQ9Y266 331 aa16■□□□□ 0.15
ATPAF1-205ENST00000487193 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
ATPAF1-205ENST00000487193 TJAP1Q5JTD0 557 aa15.99■□□□□ 0.15
ATPAF1-205ENST00000487193 MYLIPQ8WY64 445 aa15.99■□□□□ 0.15
ATPAF1-205ENST00000487193 CRISPLD2Q9H0B8 497 aa15.99■□□□□ 0.15
ATPAF1-205ENST00000487193 ZCCHC17Q9NP64 241 aaKnown RBP15.99■□□□□ 0.15
ATPAF1-205ENST00000487193 CAPN2P17655 700 aa15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 RBM5P52756 815 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 MTMR14Q8NCE2 650 aa15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 CFAP53Q96M91 514 aa15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 DLG5Q8TDM6 1919 aa15.98■□□□□ 0.15
ATPAF1-205ENST00000487193 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 FCGRTP55899 365 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 SNAPC2Q13487 334 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 POTEDQ86YR6 584 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 PLBD2Q8NHP8 589 aa15.97■□□□□ 0.15
ATPAF1-205ENST00000487193 JARID2Q92833 1246 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms