RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 UBAP1LF5GYI3 381 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 F11P03951 625 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 HOXC9P31274 260 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 BMP2KLQ5H9B9 411 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 WDR44Q5JSH3 913 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 CYP2U1Q7Z449 544 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 CHD1LQ86WJ1 897 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 FAM117AQ9C073 453 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 ARHGEF10LQ9HCE6 1279 aa8.82□□□□□ -1
SMARCAL1-212ENST00000486983 MED1Q15648 1581 aaPredicted RBP8.82□□□□□ -1
SMARCAL1-212ENST00000486983 RGPD8O14715 1765 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-212ENST00000486983 NPHP4O75161 1426 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-212ENST00000486983 ATP10DQ9P241 1426 aa8.81□□□□□ -1
SMARCAL1-212ENST00000486983 AMPHP49418 695 aa8.81□□□□□ -1
SMARCAL1-212ENST00000486983 TAS1R3Q7RTX0 852 aa8.81□□□□□ -1
SMARCAL1-212ENST00000486983 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
SMARCAL1-212ENST00000486983 GPBP1L1Q9HC44 474 aaPredicted RBP8.81□□□□□ -1
SMARCAL1-212ENST00000486983 PXDNLA1KZ92 1463 aa8.81□□□□□ -1
SMARCAL1-212ENST00000486983 NCAPD2Q15021 1401 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 SLIT3O75094 1523 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 ZBBXA8MT70 800 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 FBXO45P0C2W1 286 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 RFC5P40937 340 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 PIP4K2BP78356 416 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 DCTN1Q14203 1278 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 MTHFSDQ2M296 383 aaKnown RBP8.8□□□□□ -1
SMARCAL1-212ENST00000486983 MCM10Q7L590 875 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 ALYREFQ86V81 257 aaKnown RBP8.8□□□□□ -1
SMARCAL1-212ENST00000486983 KLRG1Q96E93 195 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 GPAMQ9HCL2 828 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 MAP3K5Q99683 1374 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
SMARCAL1-212ENST00000486983 OVOS2A0A0G2JMS6 1433 aa8.8□□□□□ -1
SMARCAL1-212ENST00000486983 KIF1AQ12756 1690 aa8.79□□□□□ -1
SMARCAL1-212ENST00000486983 CAMTA1Q9Y6Y1 1673 aa8.79□□□□□ -1
SMARCAL1-212ENST00000486983 RPAP2Q8IXW5 612 aaPredicted RBP8.79□□□□□ -1
SMARCAL1-212ENST00000486983 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
SMARCAL1-212ENST00000486983 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
SMARCAL1-212ENST00000486983 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
SMARCAL1-212ENST00000486983 RRAGCQ9HB90 399 aa8.79□□□□□ -1
SMARCAL1-212ENST00000486983 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-212ENST00000486983 MSH6P52701 1360 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 PLEKHG2Q9H7P9 1386 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 GNAT3A8MTJ3 354 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 ELL2O00472 640 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-212ENST00000486983 TRAK2O60296 914 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 HOXB4P17483 251 aaPredicted RBP8.78□□□□□ -1
SMARCAL1-212ENST00000486983 DEKP35659 375 aaKnown RBP8.78□□□□□ -1
SMARCAL1-212ENST00000486983 RBM25P49756 843 aaKnown RBP8.78□□□□□ -1
SMARCAL1-212ENST00000486983 SIRT2Q8IXJ6 389 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 ANKRD44Q8N8A2 993 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 ABTB2Q8N961 1025 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 CHMP4AQ9BY43 222 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 SUV39H2Q9H5I1 410 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 DCTPP1Q9H773 170 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 TSPYL4Q9UJ04 414 aa8.78□□□□□ -1
SMARCAL1-212ENST00000486983 CEMIPQ8WUJ3 1361 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 LTN1O94822 1766 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 CCT4P50991 539 aaKnown RBP8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 UBAP2LQ14157 1087 aaKnown RBP8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 GRIN2CQ14957 1233 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 NFKBIBQ15653 356 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 EDARADDQ8WWZ3 215 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 IP6K1Q92551 441 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 C22orf23Q9BZE7 217 aa8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 GDF2Q9UK05 429 aaPredicted RBP8.77□□□□□ -1.01
SMARCAL1-212ENST00000486983 ABCC6O95255 1503 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 HOXB7P09629 217 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 CEP85Q6P2H3 762 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 LNPKQ9C0E8 428 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 PCDHB11Q9Y5F2 797 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 DCCP43146 1447 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 NCOA3Q9Y6Q9 1424 aa8.76□□□□□ -1.01
SMARCAL1-212ENST00000486983 LMO7Q8WWI1 1683 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 TRPM3Q9HCF6 1732 aaPredicted RBP8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 SOCS7O14512 581 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 HMMRO75330 724 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 HSPA1LP34931 641 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 ANKRD45Q5TZF3 282 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 RNF20Q5VTR2 975 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 CCDC30Q5VVM6 783 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 LINC00114Q6XXX2 140 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 STK31Q9BXU1 1019 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 ANTXR1Q9H6X2 564 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 PHF24Q9UPV7 400 aa8.75□□□□□ -1.01
SMARCAL1-212ENST00000486983 FOXO3O43524 673 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 IL2RAP01589 272 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 PHKA2P46019 1235 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 MFAP1P55081 439 aaKnown RBP8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 TAF7Q15545 349 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 KRT24Q2M2I5 525 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 GOLGA6L1Q8N7Z2 621 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 SNX21Q969T3 373 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 GJD4Q96KN9 370 aaPredicted RBP8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 PSMG3-AS1Q96PY0 264 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
SMARCAL1-212ENST00000486983 KDM3BQ7LBC6 1761 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms