RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 NCBP3Q53F19 620 aaKnown RBP25.53■■□□□ 1.68
PHF1-208ENST00000486845 ZNF804AQ7Z570 1209 aa25.53■■□□□ 1.68
PHF1-208ENST00000486845 CERS5Q8N5B7 392 aa25.53■■□□□ 1.68
PHF1-208ENST00000486845 A0A1B0GUL6 1792 aa25.53■■□□□ 1.68
PHF1-208ENST00000486845 MYO1BO43795 1136 aa25.52■■□□□ 1.68
PHF1-208ENST00000486845 PPP1R12BO60237 982 aaPredicted RBP25.52■■□□□ 1.68
PHF1-208ENST00000486845 TAF5LO75529 589 aa25.52■■□□□ 1.68
PHF1-208ENST00000486845 FANCIQ9NVI1 1328 aa25.52■■□□□ 1.68
PHF1-208ENST00000486845 SNAP23O00161 211 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 ZBTB48P10074 688 aaPredicted RBP25.51■■□□□ 1.67
PHF1-208ENST00000486845 IL1R1P14778 569 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 FKBP1AP62942 108 aaKnown RBP25.51■■□□□ 1.67
PHF1-208ENST00000486845 CCDC184Q52MB2 194 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 HELBQ8NG08 1087 aaPredicted RBP25.51■■□□□ 1.67
PHF1-208ENST00000486845 R3HDMLQ9H3Y0 253 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 FZD1Q9UP38 647 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 CHMP3Q9Y3E7 222 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 SSC5DA1L4H1 1573 aa25.51■■□□□ 1.67
PHF1-208ENST00000486845 UNCXA6NJT0 531 aa25.5■■□□□ 1.67
PHF1-208ENST00000486845 FOXO4P98177 505 aa25.5■■□□□ 1.67
PHF1-208ENST00000486845 SUPT20HL1Q3ZLR7 823 aa25.5■■□□□ 1.67
PHF1-208ENST00000486845 CFAP100Q494V2 611 aa25.5■■□□□ 1.67
PHF1-208ENST00000486845 SPDYE2BA6NHP3 402 aa25.49■■□□□ 1.67
PHF1-208ENST00000486845 SPDYE6P0CI01 402 aa25.49■■□□□ 1.67
PHF1-208ENST00000486845 IFNL1Q8IU54 200 aa25.49■■□□□ 1.67
PHF1-208ENST00000486845 LAMB1P07942 1786 aa25.49■■□□□ 1.67
PHF1-208ENST00000486845 F8W031 263 aaPredicted RBP25.48■■□□□ 1.67
PHF1-208ENST00000486845 WNK4Q96J92 1243 aa25.48■■□□□ 1.67
PHF1-208ENST00000486845 CLMNQ96JQ2 1002 aa25.48■■□□□ 1.67
PHF1-208ENST00000486845 CLRN2A0PK11 232 aa25.47■■□□□ 1.67
PHF1-208ENST00000486845 VAMP4O75379 141 aa25.47■■□□□ 1.67
PHF1-208ENST00000486845 VEZTQ9HBM0 779 aa25.47■■□□□ 1.67
PHF1-208ENST00000486845 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.47■■□□□ 1.67
PHF1-208ENST00000486845 PCDHAC2Q9Y5I4 1007 aa25.47■■□□□ 1.67
PHF1-208ENST00000486845 BEND3Q5T5X7 828 aa25.46■■□□□ 1.67
PHF1-208ENST00000486845 LMBR1LQ6UX01 489 aa25.46■■□□□ 1.67
PHF1-208ENST00000486845 IREB2P48200 963 aaKnown RBP25.45■■□□□ 1.66
PHF1-208ENST00000486845 CCDC57Q2TAC2 916 aa25.45■■□□□ 1.66
PHF1-208ENST00000486845 TAF7LQ5H9L4 462 aa25.45■■□□□ 1.66
PHF1-208ENST00000486845 WDR63Q8IWG1 891 aa25.45■■□□□ 1.66
PHF1-208ENST00000486845 PRMT6Q96LA8 375 aaPredicted RBP25.45■■□□□ 1.66
PHF1-208ENST00000486845 F6X3S4 739 aa25.44■■□□□ 1.66
PHF1-208ENST00000486845 RBM5P52756 815 aaKnown RBP eCLIP25.44■■□□□ 1.66
PHF1-208ENST00000486845 LDHAL6AQ6ZMR3 332 aa25.44■■□□□ 1.66
PHF1-208ENST00000486845 TRIM17Q9Y577 477 aa25.44■■□□□ 1.66
PHF1-208ENST00000486845 IGF2BP3O00425 579 aaKnown RBP eCLIP25.43■■□□□ 1.66
PHF1-208ENST00000486845 EXOSC9Q06265 439 aaKnown RBP25.43■■□□□ 1.66
PHF1-208ENST00000486845 NBPF12Q5TAG4 269 aaPredicted RBP25.43■■□□□ 1.66
PHF1-208ENST00000486845 OTUD7BQ6GQQ9 843 aa25.43■■□□□ 1.66
PHF1-208ENST00000486845 CNNM1Q9NRU3 951 aa25.43■■□□□ 1.66
PHF1-208ENST00000486845 JAG2Q9Y219 1238 aa25.43■■□□□ 1.66
PHF1-208ENST00000486845 GRM8O00222 908 aa25.42■■□□□ 1.66
PHF1-208ENST00000486845 PLIN1O60240 522 aa25.42■■□□□ 1.66
PHF1-208ENST00000486845 RASA3Q14644 834 aa25.42■■□□□ 1.66
PHF1-208ENST00000486845 OTOP1Q7RTM1 612 aa25.42■■□□□ 1.66
PHF1-208ENST00000486845 ANKRD13AQ8IZ07 590 aa25.42■■□□□ 1.66
PHF1-208ENST00000486845 FAM205AQ6ZU69 1335 aa25.41■■□□□ 1.66
PHF1-208ENST00000486845 TNFAIP1Q13829 316 aa25.41■■□□□ 1.66
PHF1-208ENST00000486845 EPHA10Q5JZY3 1008 aa25.41■■□□□ 1.66
PHF1-208ENST00000486845 ERO1AQ96HE7 468 aa25.41■■□□□ 1.66
PHF1-208ENST00000486845 ZNF594Q96JF6 807 aaPredicted RBP25.41■■□□□ 1.66
PHF1-208ENST00000486845 AOX1Q06278 1338 aa25.4■■□□□ 1.66
PHF1-208ENST00000486845 USP2O75604 605 aaPredicted RBP25.4■■□□□ 1.66
PHF1-208ENST00000486845 INTS3Q68E01 1043 aaKnown RBP25.4■■□□□ 1.66
PHF1-208ENST00000486845 C9orf78Q9NZ63 289 aaPredicted RBP25.39■■□□□ 1.66
PHF1-208ENST00000486845 SERPINA10Q9UK55 444 aa25.39■■□□□ 1.66
PHF1-208ENST00000486845 GJA5P36382 358 aa25.38■■□□□ 1.65
PHF1-208ENST00000486845 CRHR2Q13324 411 aa25.38■■□□□ 1.65
PHF1-208ENST00000486845 UBE4AQ14139 1066 aa25.38■■□□□ 1.65
PHF1-208ENST00000486845 SPDYE2Q495Y8 402 aa25.38■■□□□ 1.65
PHF1-208ENST00000486845 MFSD14BQ5SR56 506 aa25.38■■□□□ 1.65
PHF1-208ENST00000486845 TDRD7Q8NHU6 1098 aaKnown RBP25.38■■□□□ 1.65
PHF1-208ENST00000486845 MRS2Q9HD23 443 aa25.38■■□□□ 1.65
PHF1-208ENST00000486845 SALL2Q9Y467 1007 aaPredicted RBP25.38■■□□□ 1.65
PHF1-208ENST00000486845 OTOFQ9HC10 1997 aa25.37■■□□□ 1.65
PHF1-208ENST00000486845 ALDH1L1O75891 902 aa25.37■■□□□ 1.65
PHF1-208ENST00000486845 ZNF70Q9UC06 446 aaPredicted RBP25.37■■□□□ 1.65
PHF1-208ENST00000486845 TTF2Q9UNY4 1162 aaKnown RBP25.37■■□□□ 1.65
PHF1-208ENST00000486845 ARAP2Q8WZ64 1704 aa25.37■■□□□ 1.65
PHF1-208ENST00000486845 TESPA1A2RU30 521 aaPredicted RBP25.36■■□□□ 1.65
PHF1-208ENST00000486845 HIBADHP31937 336 aaKnown RBP25.36■■□□□ 1.65
PHF1-208ENST00000486845 CD99L2Q8TCZ2 262 aa25.36■■□□□ 1.65
PHF1-208ENST00000486845 HTTP42858 3142 aa25.35■■□□□ 1.65
PHF1-208ENST00000486845 TDRD3Q9H7E2 651 aaKnown RBP25.35■■□□□ 1.65
PHF1-208ENST00000486845 ELP3Q9H9T3 547 aa25.35■■□□□ 1.65
PHF1-208ENST00000486845 PTPN22Q9Y2R2 807 aa25.35■■□□□ 1.65
PHF1-208ENST00000486845 GYG1P46976 350 aa25.34■■□□□ 1.65
PHF1-208ENST00000486845 GCC1Q96CN9 775 aa25.34■■□□□ 1.65
PHF1-208ENST00000486845 OPTNQ96CV9 577 aa25.34■■□□□ 1.65
PHF1-208ENST00000486845 FAM84BQ96KN1 310 aaPredicted RBP25.34■■□□□ 1.65
PHF1-208ENST00000486845 SRCIN1Q9C0H9 1055 aa25.34■■□□□ 1.65
PHF1-208ENST00000486845 EFCC1Q9HA90 598 aa25.34■■□□□ 1.65
PHF1-208ENST00000486845 SP3Q02447 781 aa25.33■■□□□ 1.65
PHF1-208ENST00000486845 DZIP1LQ8IYY4 767 aaKnown RBP25.33■■□□□ 1.65
PHF1-208ENST00000486845 PTPN18Q99952 460 aa25.33■■□□□ 1.65
PHF1-208ENST00000486845 RBBP6Q7Z6E9 1792 aaKnown RBP25.33■■□□□ 1.65
PHF1-208ENST00000486845 TNNI2P48788 182 aa25.32■■□□□ 1.64
PHF1-208ENST00000486845 SLC4A10Q6U841 1118 aa25.32■■□□□ 1.64
PHF1-208ENST00000486845 POTEFA5A3E0 1075 aa25.31■■□□□ 1.64
PHF1-208ENST00000486845 ARMC5Q96C12 935 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms