RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ADCY5O95622 1261 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 EVCP57679 992 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 CCT2P78371 535 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 VGLL2Q8N8G2 317 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 CNNM1Q9NRU3 951 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 DACT1Q9NYF0 836 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 CFAP45Q9UL16 551 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 NUP98P52948 1817 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 PDE8AO60658 829 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 IL6STP40189 918 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 MCAMP43121 646 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 PI16Q6UXB8 463 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 CHST3Q7LGC8 479 aa21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 GJD4Q96KN9 370 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 CDCA7Q9BWT1 371 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.16■□□□□ 0.983e-7■■■□□ 15.9
PDLIM7-207ENST00000486828 PUS7LQ9H0K6 701 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-207ENST00000486828 FGAP02671 866 aa21.15■□□□□ 0.98
PDLIM7-207ENST00000486828 FAM98CQ17RN3 349 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-207ENST00000486828 SYTL4Q96C24 671 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-207ENST00000486828 PGBD1Q96JS3 809 aa21.15■□□□□ 0.98
PDLIM7-207ENST00000486828 AKAP11Q9UKA4 1901 aa21.14■□□□□ 0.98
PDLIM7-207ENST00000486828 ZSCAN25Q6NSZ9 544 aa21.14■□□□□ 0.98
PDLIM7-207ENST00000486828 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.98
PDLIM7-207ENST00000486828 TNMDQ9H2S6 317 aa21.14■□□□□ 0.98
PDLIM7-207ENST00000486828 CLSTN2Q9H4D0 955 aa21.14■□□□□ 0.98
PDLIM7-207ENST00000486828 NCOA5Q9HCD5 579 aaKnown RBP21.14■□□□□ 0.98
PDLIM7-207ENST00000486828 MYH15Q9Y2K3 1946 aa21.14■□□□□ 0.97
PDLIM7-207ENST00000486828 GPAA1O43292 621 aa21.14■□□□□ 0.97
PDLIM7-207ENST00000486828 RBM43Q6ZSC3 357 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-207ENST00000486828 NAP1L2Q9ULW6 460 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-207ENST00000486828 LRP5O75197 1615 aa21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 ADD1P35611 737 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 HAND2P61296 217 aa21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 TTF1Q15361 905 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 CAMK4Q16566 473 aa21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 ZNF34Q8IZ26 560 aa21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 BICD2Q8TD16 824 aa21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
PDLIM7-207ENST00000486828 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 PDE8BO95263 885 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 ADD2P35612 726 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 MB21D2Q8IYB1 491 aaPredicted RBP21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 TBC1D2BQ9UPU7 963 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 TYRO3Q06418 890 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 ATL3Q6DD88 541 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 FAM200AQ8TCP9 573 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 MRVI1Q9Y6F6 885 aa21.12■□□□□ 0.97
PDLIM7-207ENST00000486828 DDX60Q8IY21 1712 aaKnown RBP21.11■□□□□ 0.97
PDLIM7-207ENST00000486828 CARMIL3Q8ND23 1372 aa21.11■□□□□ 0.97
PDLIM7-207ENST00000486828 NCOA7Q8NI08 942 aa21.11■□□□□ 0.97
PDLIM7-207ENST00000486828 WDR19Q8NEZ3 1342 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 PRC1O43663 620 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 NR1I2O75469 434 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 AK7Q96M32 723 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 RCOR1Q9UKL0 485 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 ZNF213O14771 459 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 ARID4AP29374 1257 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 FOSBP53539 338 aa21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 GPHNQ9NQX3 736 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-207ENST00000486828 MROH5Q6ZUA9 1318 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 UQCRFS1P1P0C7P4 283 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 UBE3CQ15386 1083 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 DDB1Q16531 1140 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 CCDC102BQ68D86 513 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 CKAP2LQ8IYA6 745 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 ZNF396Q96N95 335 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 PIH1D3Q9NQM4 214 aaKnown RBP21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 ARAP2Q8WZ64 1704 aa21.09■□□□□ 0.97
PDLIM7-207ENST00000486828 TPM2P07951 284 aa21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 FDPSP14324 419 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 RXRBP28702 533 aa21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 EIF5P55010 431 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 ANTXR2P58335 489 aa21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 PUM3Q15397 648 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 RALYLQ86SE5 291 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-207ENST00000486828 AP5Z1O43299 807 aa21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 DHX16O60231 1041 aaKnown RBP21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 FGFR2P21802 821 aa21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 TERF1P54274 439 aa21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 RBM6P78332 1123 aaKnown RBP21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 KIAA2012Q0VF49 1180 aa21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 LPIN2Q92539 896 aa21.08■□□□□ 0.96
PDLIM7-207ENST00000486828 KAT6BQ8WYB5 2073 aa21.07■□□□□ 0.96
PDLIM7-207ENST00000486828 KLF18A0A0U1RQI7 1052 aa21.07■□□□□ 0.96
PDLIM7-207ENST00000486828 PHKA1P46020 1223 aa21.07■□□□□ 0.96
PDLIM7-207ENST00000486828 A0A0G2JS52 829 aa21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 ONECUT3O60422 494 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 PLCB2Q00722 1185 aa21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 CEBPZQ03701 1054 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 USP28Q96RU2 1077 aa21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 HPS5Q9UPZ3 1129 aa21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 IDH1O75874 414 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 INTS5Q6P9B9 1019 aaKnown RBP21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 CCDC87Q9NVE4 849 aa21.06■□□□□ 0.96
PDLIM7-207ENST00000486828 ZNF532Q9HCE3 1301 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 GOLGA8BA8MQT2 603 aa21.05■□□□□ 0.96
PDLIM7-207ENST00000486828 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms