RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
MCF2L-227ENST00000486806 YDJCA8MPS7 323 aa11.66□□□□□ -0.54
MCF2L-227ENST00000486806 CYP2E1P05181 493 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-227ENST00000486806 ZAP70P43403 619 aa11.66□□□□□ -0.54
MCF2L-227ENST00000486806 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
MCF2L-227ENST00000486806 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
MCF2L-227ENST00000486806 DNAJC2Q99543 621 aaKnown RBP11.66□□□□□ -0.54
MCF2L-227ENST00000486806 AKAP11Q9UKA4 1901 aa11.66□□□□□ -0.54
MCF2L-227ENST00000486806 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
MCF2L-227ENST00000486806 GOLIM4O00461 696 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 GRIN3BO60391 1043 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 SDSP20132 328 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 LMNB1P20700 586 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 GPR162Q16538 588 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 ARHGAP27Q6ZUM4 889 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 NIM1KQ8IY84 436 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 ANTXR1Q9H6X2 564 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 SNRKQ9NRH2 765 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
MCF2L-227ENST00000486806 MAP4K4O95819 1239 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-227ENST00000486806 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
MCF2L-227ENST00000486806 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
MCF2L-227ENST00000486806 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
MCF2L-227ENST00000486806 PIH1D3Q9NQM4 214 aaKnown RBP11.64□□□□□ -0.55
MCF2L-227ENST00000486806 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
MCF2L-227ENST00000486806 SCN9AQ15858 1988 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 DOCK2Q92608 1830 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 G3V3G9 751 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 FZD9O00144 591 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 FRAT2O75474 233 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-227ENST00000486806 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
MCF2L-227ENST00000486806 GTF2IP78347 998 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 CHAF1AQ13111 956 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-227ENST00000486806 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
MCF2L-227ENST00000486806 DACT2Q5SW24 774 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 DCAF8Q5TAQ9 597 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 STRIP1Q5VSL9 837 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 WDR66Q8TBY9 1149 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 KCNQ5Q9NR82 932 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 JAG2Q9Y219 1238 aa11.63□□□□□ -0.55
MCF2L-227ENST00000486806 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 IGSF3O75054 1194 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 MFSD14BQ5SR56 506 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 TTLL5Q6EMB2 1281 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 TICAM2Q86XR7 235 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 ZGPATQ8N5A5 531 aaKnown RBP11.62□□□□□ -0.55
MCF2L-227ENST00000486806 CERS5Q8N5B7 392 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 JDP2Q8WYK2 163 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 PSME4Q14997 1843 aa11.62□□□□□ -0.55
MCF2L-227ENST00000486806 CHD4Q14839 1912 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 MYH13Q9UKX3 1938 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 VIL1P09327 827 aaKnown RBP11.61□□□□□ -0.55
MCF2L-227ENST00000486806 PRDX5P30044 214 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 GRIK5Q16478 980 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 ZNF384Q8TF68 577 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 FSD1Q9BTV5 496 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 SUGT1Q9Y2Z0 365 aa11.61□□□□□ -0.55
MCF2L-227ENST00000486806 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 ZC3H4Q9UPT8 1303 aaKnown RBP11.6□□□□□ -0.55
MCF2L-227ENST00000486806 TCRBV5S4A2TA0A5A2 114 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 PSMD14O00487 310 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 IDH1O75874 414 aaKnown RBP11.6□□□□□ -0.55
MCF2L-227ENST00000486806 RAD17O75943 681 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 CHGBP05060 677 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 CXCL9Q07325 125 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 C9orf131Q5VYM1 1079 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 GMLQ99445 158 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 MXD3Q9BW11 206 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 RNF181Q9P0P0 153 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 ABCF2Q9UG63 623 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 MYO3BQ8WXR4 1341 aa11.6□□□□□ -0.55
MCF2L-227ENST00000486806 SBF1O95248 1867 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 DICER1Q9UPY3 1922 aaKnown RBP11.59□□□□□ -0.55
MCF2L-227ENST00000486806 CDC45O75419 566 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 PDE6AP16499 860 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 ADD2P35612 726 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 MAP3K12Q12852 859 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 SPTY2D1Q68D10 685 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-227ENST00000486806 CIAPIN1Q6FI81 312 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-227ENST00000486806 TMED8Q6PL24 325 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-227ENST00000486806 ERICH6Q7L0X2 663 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 FBXW7Q969H0 707 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 NSUN4Q96CB9 384 aaKnown RBP11.59□□□□□ -0.55
MCF2L-227ENST00000486806 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.59□□□□□ -0.55
MCF2L-227ENST00000486806 LRP2BPQ9P2M1 347 aa11.59□□□□□ -0.55
MCF2L-227ENST00000486806 RNF113AO15541 343 aaKnown RBP11.58□□□□□ -0.56
MCF2L-227ENST00000486806 LDHBP07195 334 aaKnown RBP11.58□□□□□ -0.56
MCF2L-227ENST00000486806 ZFYP08048 801 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-227ENST00000486806 CHMLP26374 656 aa11.58□□□□□ -0.56
MCF2L-227ENST00000486806 EIF6P56537 245 aaKnown RBP11.58□□□□□ -0.56
MCF2L-227ENST00000486806 MECOMQ03112 1051 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms