RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 ZMYND8Q9ULU4 1186 aaPredicted RBP11.03□□□□□ -0.64
APTX-228ENST00000486724 PPP2R3BQ9Y5P8 575 aa11.03□□□□□ -0.64
APTX-228ENST00000486724 COL3A1P02461 1466 aaPredicted RBP11.02□□□□□ -0.65
APTX-228ENST00000486724 CCL15-CCL14A0A0B4J2E2 113 aa11.02□□□□□ -0.65
APTX-228ENST00000486724 CCL15Q16663 113 aa11.02□□□□□ -0.65
APTX-228ENST00000486724 FAM161BQ96MY7 647 aa11.02□□□□□ -0.65
APTX-228ENST00000486724 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
APTX-228ENST00000486724 KNSTRNQ9Y448 316 aa11.02□□□□□ -0.65
APTX-228ENST00000486724 ANP32CO43423 234 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 ECM2O94769 699 aaPredicted RBP11.01□□□□□ -0.65
APTX-228ENST00000486724 HOXD10P28358 340 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 GTF2A2P52657 109 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 MAP3K12Q12852 859 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 SF3B3Q15393 1217 aaKnown RBP11.01□□□□□ -0.65
APTX-228ENST00000486724 TAF7Q15545 349 aaPredicted RBP11.01□□□□□ -0.65
APTX-228ENST00000486724 SUPT20HL1Q3ZLR7 823 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 DACT2Q5SW24 774 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 FAM43AQ8N2R8 423 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 HELBQ8NG08 1087 aaPredicted RBP11.01□□□□□ -0.65
APTX-228ENST00000486724 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
APTX-228ENST00000486724 SYNGAP1Q96PV0 1343 aa11.01□□□□□ -0.65
APTX-228ENST00000486724 COL2A1P02458 1487 aaPredicted RBP11□□□□□ -0.65
APTX-228ENST00000486724 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
APTX-228ENST00000486724 PRKAR2BP31323 418 aa11□□□□□ -0.65
APTX-228ENST00000486724 RPS8P62241 208 aaKnown RBP11□□□□□ -0.65
APTX-228ENST00000486724 ZNF697Q5TEC3 545 aa11□□□□□ -0.65
APTX-228ENST00000486724 NECAB2Q7Z6G3 386 aa11□□□□□ -0.65
APTX-228ENST00000486724 MIER1Q8N108 512 aa11□□□□□ -0.65
APTX-228ENST00000486724 UNC93B1Q9H1C4 597 aa11□□□□□ -0.65
APTX-228ENST00000486724 ELP3Q9H9T3 547 aa11□□□□□ -0.65
APTX-228ENST00000486724 FAM205AQ6ZU69 1335 aa11□□□□□ -0.65
APTX-228ENST00000486724 MYPNQ86TC9 1320 aa11□□□□□ -0.65
APTX-228ENST00000486724 TFRCP02786 760 aaKnown RBP10.99□□□□□ -0.65
APTX-228ENST00000486724 SYN1P17600 705 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 OSBPP22059 807 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 PSMC4P43686 418 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 TJAP1Q5JTD0 557 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 SLAIN1Q8ND83 568 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 ZBED3Q96IU2 234 aaPredicted RBP10.99□□□□□ -0.65
APTX-228ENST00000486724 PAWRQ96IZ0 340 aaKnown RBP10.99□□□□□ -0.65
APTX-228ENST00000486724 SNX27Q96L92 541 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 ZCCHC17Q9NP64 241 aaKnown RBP10.99□□□□□ -0.65
APTX-228ENST00000486724 MIS18AQ9NYP9 233 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 ECM29Q5VYK3 1845 aa10.99□□□□□ -0.65
APTX-228ENST00000486724 ZBTB22O15209 634 aa10.98□□□□□ -0.65
APTX-228ENST00000486724 USP2O75604 605 aaPredicted RBP10.98□□□□□ -0.65
APTX-228ENST00000486724 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
APTX-228ENST00000486724 STRIP1Q5VSL9 837 aa10.98□□□□□ -0.65
APTX-228ENST00000486724 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
APTX-228ENST00000486724 PNISRQ8TF01 805 aaKnown RBP10.98□□□□□ -0.65
APTX-228ENST00000486724 CDX2Q99626 313 aaPredicted RBP10.98□□□□□ -0.65
APTX-228ENST00000486724 ZNF804BA4D1E1 1349 aa10.98□□□□□ -0.65
APTX-228ENST00000486724 HTATSF1O43719 755 aaKnown RBP10.97□□□□□ -0.65
APTX-228ENST00000486724 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
APTX-228ENST00000486724 CTGFP29279 349 aa10.97□□□□□ -0.65
APTX-228ENST00000486724 EIF4A1P60842 406 aaKnown RBP10.97□□□□□ -0.65
APTX-228ENST00000486724 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
APTX-228ENST00000486724 DEFB118Q96PH6 123 aa10.97□□□□□ -0.65
APTX-228ENST00000486724 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
APTX-228ENST00000486724 RSPH6AQ9H0K4 717 aa10.97□□□□□ -0.65
APTX-228ENST00000486724 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
APTX-228ENST00000486724 XDHP47989 1333 aa10.97□□□□□ -0.65
APTX-228ENST00000486724 ADGRA2Q96PE1 1338 aa10.97□□□□□ -0.65
APTX-228ENST00000486724 MED23Q9ULK4 1368 aa10.96□□□□□ -0.65
APTX-228ENST00000486724 NBPF12Q5TAG4 269 aaPredicted RBP10.96□□□□□ -0.65
APTX-228ENST00000486724 KIAA0825Q8IV33 1275 aa10.96□□□□□ -0.65
APTX-228ENST00000486724 CRISPLD2Q9H0B8 497 aa10.96□□□□□ -0.65
APTX-228ENST00000486724 ARIH1Q9Y4X5 557 aaPredicted RBP10.96□□□□□ -0.65
APTX-228ENST00000486724 CETPP11597 493 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 PRKCZQ05513 592 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 DLGAP5Q15398 846 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 C17orf99Q6UX52 265 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 ANKLE1Q8NAG6 615 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 DIS3LQ8TF46 1054 aaKnown RBP10.95□□□□□ -0.66
APTX-228ENST00000486724 FAM89AQ96GI7 184 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 PAK6Q9NQU5 681 aaPredicted RBP10.95□□□□□ -0.66
APTX-228ENST00000486724 BDP1A6H8Y1 2624 aa10.95□□□□□ -0.66
APTX-228ENST00000486724 PIEZO1Q92508 2521 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 BTBD19C9JJ37 291 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 CCER2I3L3R5 266 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 MYO1BO43795 1136 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 VGLL4Q14135 290 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 PDIA6Q15084 440 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
APTX-228ENST00000486724 INHAP05111 366 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 FOSL2P15408 326 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 RALBP1Q15311 655 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 PROSER3Q2NL68 480 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.93□□□□□ -0.66
APTX-228ENST00000486724 MTMR14Q8NCE2 650 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 MYLIPQ8WY64 445 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 VEZTQ9HBM0 779 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 CPA4Q9UI42 421 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 HCN4Q9Y3Q4 1203 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms