RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CTSHP09668 335 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 TIMP2P16035 220 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 RNF144AP50876 292 aaPredicted RBP8.04□□□□□ -1.12
USP41-204ENST00000486536 PIP4K2BP78356 416 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 HIF1AQ16665 826 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 C4orf17Q53FE4 359 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 SUSD3Q96L08 255 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 TANGO6Q9C0B7 1094 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 ACBD3Q9H3P7 528 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.04□□□□□ -1.12
USP41-204ENST00000486536 NINLQ9Y2I6 1382 aa8.04□□□□□ -1.12
USP41-204ENST00000486536 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
USP41-204ENST00000486536 PTCH1Q13635 1447 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 CPS1P31327 1500 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 SETD1AO15047 1707 aaKnown RBP8.03□□□□□ -1.12
USP41-204ENST00000486536 POLR1AO95602 1720 aaPredicted RBP8.03□□□□□ -1.12
USP41-204ENST00000486536 KTN1Q86UP2 1357 aaKnown RBP8.03□□□□□ -1.12
USP41-204ENST00000486536 TGFBR3LH3BV60 316 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 J3QL48 77 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 EIF4BP23588 611 aaKnown RBP8.03□□□□□ -1.12
USP41-204ENST00000486536 HSPA1LP34931 641 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP41-204ENST00000486536 CRELD1Q96HD1 420 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 TINF2Q9BSI4 451 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 DMGDHQ9UI17 866 aaKnown RBP8.03□□□□□ -1.12
USP41-204ENST00000486536 PTPRUQ92729 1446 aa8.03□□□□□ -1.12
USP41-204ENST00000486536 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
USP41-204ENST00000486536 HMGB1P09429 215 aaKnown RBP8.02□□□□□ -1.13
USP41-204ENST00000486536 PHKA2P46019 1235 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 XKR5Q6UX68 686 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 WAPLQ7Z5K2 1190 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 ZNF280CQ8ND82 737 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 PRKRIP1Q9H875 184 aaPredicted RBP8.02□□□□□ -1.13
USP41-204ENST00000486536 PANK3Q9H999 370 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 ZDHHC3Q9NYG2 299 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 ANKIB1Q9P2G1 1089 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 PRKAG2Q9UGJ0 569 aa8.02□□□□□ -1.13
USP41-204ENST00000486536 ARHGEF28Q8N1W1 1705 aaKnown RBP8.02□□□□□ -1.13
USP41-204ENST00000486536 ROBO2Q9HCK4 1378 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 PLEKHH1Q9ULM0 1364 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 TOM1O60784 492 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 TNFRSF21O75509 655 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
USP41-204ENST00000486536 SAFB2Q14151 953 aaKnown RBP eCLIP8.01□□□□□ -1.13
USP41-204ENST00000486536 RALBP1Q15311 655 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 IER5Q5VY09 327 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 USPL1Q5W0Q7 1092 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 CCDC74AQ96AQ1 378 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 KLRG1Q96E93 195 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 INSM2Q96T92 566 aaPredicted RBP8.01□□□□□ -1.13
USP41-204ENST00000486536 FNDC3AQ9Y2H6 1198 aaKnown RBP8.01□□□□□ -1.13
USP41-204ENST00000486536 TULP4Q9NRJ4 1543 aa8.01□□□□□ -1.13
USP41-204ENST00000486536 KNDC1Q76NI1 1749 aa8□□□□□ -1.13
USP41-204ENST00000486536 NPC1L1Q9UHC9 1359 aa8□□□□□ -1.13
USP41-204ENST00000486536 QRICH2Q9H0J4 1663 aa8□□□□□ -1.13
USP41-204ENST00000486536 GIPC1O14908 333 aa8□□□□□ -1.13
USP41-204ENST00000486536 KCNA6P17658 529 aa8□□□□□ -1.13
USP41-204ENST00000486536 TATP17735 454 aaPredicted RBP8□□□□□ -1.13
USP41-204ENST00000486536 TNNI2P48788 182 aa8□□□□□ -1.13
USP41-204ENST00000486536 IDH3AP50213 366 aa8□□□□□ -1.13
USP41-204ENST00000486536 CYP4X1Q8N118 509 aa8□□□□□ -1.13
USP41-204ENST00000486536 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
USP41-204ENST00000486536 TSEN34Q9BSV6 310 aaKnown RBP8□□□□□ -1.13
USP41-204ENST00000486536 CDK19Q9BWU1 502 aa8□□□□□ -1.13
USP41-204ENST00000486536 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
USP41-204ENST00000486536 NEUROD4Q9HD90 331 aa8□□□□□ -1.13
USP41-204ENST00000486536 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
USP41-204ENST00000486536 FOXD3Q9UJU5 478 aaPredicted RBP8□□□□□ -1.13
USP41-204ENST00000486536 DDX41Q9UJV9 622 aaKnown RBP8□□□□□ -1.13
USP41-204ENST00000486536 USP20Q9Y2K6 914 aa8□□□□□ -1.13
USP41-204ENST00000486536 KNSTRNQ9Y448 316 aa8□□□□□ -1.13
USP41-204ENST00000486536 GPC6Q9Y625 555 aaPredicted RBP8□□□□□ -1.13
USP41-204ENST00000486536 SMARCA5O60264 1052 aaPredicted RBP7.99□□□□□ -1.13
USP41-204ENST00000486536 ATP2B1P20020 1258 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 INPP5BP32019 993 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 PI16Q6UXB8 463 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 BICDL1Q6ZP65 573 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 ZNF438Q7Z4V0 828 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 ZNF654Q8IZM8 581 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 CMTR1Q8N1G2 835 aaKnown RBP7.99□□□□□ -1.13
USP41-204ENST00000486536 MEIOBQ8N635 442 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 HSH2DQ96JZ2 352 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 OSBPL7Q9BZF2 842 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 C12orf49Q9H741 205 aa7.99□□□□□ -1.13
USP41-204ENST00000486536 RTCBQ9Y3I0 505 aaKnown RBP7.99□□□□□ -1.13
USP41-204ENST00000486536 USP31Q70CQ4 1352 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 ANKRD36BQ8N2N9 1353 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 SPATA31C2B4DYI2 1134 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 HSP90B1P14625 803 aaKnown RBP7.98□□□□□ -1.13
USP41-204ENST00000486536 ARSDP51689 593 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 RACK1P63244 317 aaKnown RBP7.98□□□□□ -1.13
USP41-204ENST00000486536 POU4F2Q12837 409 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 DPH6Q7L8W6 267 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 SLC12A5Q9H2X9 1139 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 POLMQ9NP87 494 aaPredicted RBP7.98□□□□□ -1.13
USP41-204ENST00000486536 TERF2IPQ9NYB0 399 aa7.98□□□□□ -1.13
USP41-204ENST00000486536 PARD3Q8TEW0 1356 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 ADGRB2O60241 1585 aa7.97□□□□□ -1.13
USP41-204ENST00000486536 SPINT1O43278 529 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms