RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 RTL9Q8NET4 1388 aa15.6■□□□□ 0.09
PKD1-219ENST00000486339 ODF2Q5BJF6 829 aa15.6■□□□□ 0.09
PKD1-219ENST00000486339 THRAP3Q9Y2W1 955 aaKnown RBP15.6■□□□□ 0.09
PKD1-219ENST00000486339 LAMC1P11047 1609 aa15.6■□□□□ 0.09
PKD1-219ENST00000486339 SLC27A2O14975 620 aa15.6■□□□□ 0.09
PKD1-219ENST00000486339 SYCP1Q15431 976 aa15.6■□□□□ 0.09
PKD1-219ENST00000486339 CCP110O43303 1012 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 TRAF1Q13077 416 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 HEATR3Q7Z4Q2 680 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 NEXMIFQ5QGS0 1516 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
PKD1-219ENST00000486339 B4E1Z4 1266 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 KLHL40Q2TBA0 621 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 FBXO3Q9UK99 471 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 PTPDC1A2A3K4 754 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 TRIM37O94972 964 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 F13A1P00488 732 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 LRRC24Q50LG9 513 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 ZFYVE27Q5T4F4 411 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 ADAMTS13Q76LX8 1427 aa15.59■□□□□ 0.09
PKD1-219ENST00000486339 PTPRMP28827 1452 aa15.58■□□□□ 0.09
PKD1-219ENST00000486339 RXRAP19793 462 aa15.58■□□□□ 0.09
PKD1-219ENST00000486339 ZNF772Q68DY9 489 aaPredicted RBP15.58■□□□□ 0.09
PKD1-219ENST00000486339 ZKSCAN3Q9BRR0 538 aa15.58■□□□□ 0.09
PKD1-219ENST00000486339 DEF6Q9H4E7 631 aa15.58■□□□□ 0.09
PKD1-219ENST00000486339 GREM2Q9H772 168 aa15.58■□□□□ 0.09
PKD1-219ENST00000486339 C1orf167Q5SNV9 1468 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 BMP15O95972 392 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 KCNQ4P56696 695 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 CPSF1Q10570 1443 aaKnown RBP15.58■□□□□ 0.08
PKD1-219ENST00000486339 CCDC102BQ68D86 513 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 PNPLA6Q8IY17 1366 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 CALML4Q96GE6 196 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 ZNF532Q9HCE3 1301 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
PKD1-219ENST00000486339 RPS6KB1P23443 525 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 ALDH1B1P30837 517 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 KCNG4Q8TDN1 519 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 PDCL3Q9H2J4 239 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 BIN1O00499 593 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 EIF5P55010 431 aaKnown RBP15.57■□□□□ 0.08
PKD1-219ENST00000486339 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 CNPY2Q9Y2B0 182 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 IDEP14735 1019 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 GSPT1P15170 499 aaKnown RBP15.57■□□□□ 0.08
PKD1-219ENST00000486339 NAPAP54920 295 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 LUC7LQ9NQ29 371 aaKnown RBP15.57■□□□□ 0.08
PKD1-219ENST00000486339 MED14O60244 1454 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 NCAPD2Q15021 1401 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 DNM1Q05193 864 aaKnown RBP15.57■□□□□ 0.08
PKD1-219ENST00000486339 MSL1Q68DK7 614 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 LARGE2Q8N3Y3 721 aa15.57■□□□□ 0.08
PKD1-219ENST00000486339 AATFQ9NY61 560 aaKnown RBP eCLIP15.57■□□□□ 0.08
PKD1-219ENST00000486339 MAST3O60307 1309 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 NLGN1Q8N2Q7 840 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 CALML3P27482 149 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 GPS2Q13227 327 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 SEPT12Q8IYM1 358 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 TMEM87BQ96K49 555 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 SAP30BPQ9UHR5 308 aaKnown RBP15.56■□□□□ 0.08
PKD1-219ENST00000486339 PRDM1O75626 825 aa15.56■□□□□ 0.08
PKD1-219ENST00000486339 PYM1Q9BRP8 204 aaKnown RBP15.56■□□□□ 0.08
PKD1-219ENST00000486339 PIK3C2BO00750 1634 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 CNKSR2Q8WXI2 1034 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 UBA5Q9GZZ9 404 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 DLC1Q96QB1 1528 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 PPP1R12BO60237 982 aaPredicted RBP15.55■□□□□ 0.08
PKD1-219ENST00000486339 RXRBP28702 533 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 TBC1D22AQ8WUA7 517 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 PDE6BP35913 854 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 NOM1Q5C9Z4 860 aaKnown RBP15.55■□□□□ 0.08
PKD1-219ENST00000486339 PAXIP1Q6ZW49 1069 aaPredicted RBP15.55■□□□□ 0.08
PKD1-219ENST00000486339 CERS3Q8IU89 383 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 CAGE1Q8TC20 777 aa15.55■□□□□ 0.08
PKD1-219ENST00000486339 ANGEL1Q9UNK9 670 aaKnown RBP15.55■□□□□ 0.08
PKD1-219ENST00000486339 SYKP43405 635 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 TRIM75PA6NK02 468 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 PDE8BO95263 885 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 GYG1P46976 350 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 PUS3Q9BZE2 481 aaKnown RBP15.54■□□□□ 0.08
PKD1-219ENST00000486339 AMPD3Q01432 767 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 KANK3Q6NY19 840 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 PALLDQ8WX93 1383 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 SYT1P21579 422 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 ZNF165P49910 485 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 USP48Q86UV5 1035 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 NLRP10Q86W26 655 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 C6orf50Q9HD87 102 aa15.54■□□□□ 0.08
PKD1-219ENST00000486339 KIF20AO95235 890 aa15.53■□□□□ 0.08
PKD1-219ENST00000486339 RRP36Q96EU6 259 aaKnown RBP15.53■□□□□ 0.08
PKD1-219ENST00000486339 ZC3H13Q5T200 1668 aaKnown RBP15.53■□□□□ 0.08
PKD1-219ENST00000486339 ERVV-1B6SEH8 477 aa15.53■□□□□ 0.08
PKD1-219ENST00000486339 EPB41L2O43491 1005 aaKnown RBP15.53■□□□□ 0.08
PKD1-219ENST00000486339 MARCKSP29966 332 aaPredicted RBP15.53■□□□□ 0.08
PKD1-219ENST00000486339 HSPA4P34932 840 aa15.53■□□□□ 0.08
PKD1-219ENST00000486339 TNNI2P48788 182 aa15.53■□□□□ 0.08
PKD1-219ENST00000486339 CHRNDQ07001 517 aa15.53■□□□□ 0.08
PKD1-219ENST00000486339 TRMT1LQ7Z2T5 733 aaKnown RBP15.53■□□□□ 0.08
PKD1-219ENST00000486339 SUPT20HQ8NEM7 779 aa15.53■□□□□ 0.08
PKD1-219ENST00000486339 MRPS27Q92552 414 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms