RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 CHRNDQ07001 517 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 MVPQ14764 893 aaKnown RBP16.13■□□□□ 0.17
SSR4-211ENST00000486204 KIF4BQ2VIQ3 1234 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
SSR4-211ENST00000486204 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 ANKIB1Q9P2G1 1089 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 POLR2AP24928 1970 aaKnown RBP16.13■□□□□ 0.17
SSR4-211ENST00000486204 MKI67P46013 3256 aaKnown RBP16.13■□□□□ 0.17
SSR4-211ENST00000486204 MED23Q9ULK4 1368 aa16.13■□□□□ 0.17
SSR4-211ENST00000486204 POTEFA5A3E0 1075 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 FKTNO75072 461 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 GNAI2P04899 355 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
SSR4-211ENST00000486204 PDE3AQ14432 1141 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 LDHAL6AQ6ZMR3 332 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 GGA1Q9UJY5 639 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
SSR4-211ENST00000486204 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 ATP2B4P23634 1241 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 TM4SF4P48230 202 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
SSR4-211ENST00000486204 LRRC24Q50LG9 513 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
SSR4-211ENST00000486204 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 C1orf115Q9H7X2 142 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
SSR4-211ENST00000486204 ASTN2O75129 1339 aaPredicted RBP16.11■□□□□ 0.17
SSR4-211ENST00000486204 VGLL2Q8N8G2 317 aa16.1■□□□□ 0.17
SSR4-211ENST00000486204 HELBQ8NG08 1087 aaPredicted RBP16.1■□□□□ 0.17
SSR4-211ENST00000486204 EYA3Q99504 573 aa16.1■□□□□ 0.17
SSR4-211ENST00000486204 CNNM1Q9NRU3 951 aa16.1■□□□□ 0.17
SSR4-211ENST00000486204 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
SSR4-211ENST00000486204 PNMA6EA0A0J9YXQ4 647 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 SNAP23O00161 211 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 TAF5LO75529 589 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 KLRK1P26718 216 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 ANGEL2Q5VTE6 544 aaKnown RBP16.09■□□□□ 0.17
SSR4-211ENST00000486204 MOB2Q70IA6 237 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 COLQQ9Y215 455 aaPredicted RBP16.09■□□□□ 0.17
SSR4-211ENST00000486204 ZNF804BA4D1E1 1349 aa16.09■□□□□ 0.17
SSR4-211ENST00000486204 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 EYA2O00167 538 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 DLL1O00548 723 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 SRGAP3O43295 1099 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 ECE2O60344 883 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 SCARF1Q14162 830 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 DOK7Q18PE1 504 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 TXNRD3Q86VQ6 643 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 COPRSQ9NQ92 184 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
SSR4-211ENST00000486204 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.16
SSR4-211ENST00000486204 CIAO1O76071 339 aa16.07■□□□□ 0.16
SSR4-211ENST00000486204 POLA2Q14181 598 aa16.07■□□□□ 0.16
SSR4-211ENST00000486204 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
SSR4-211ENST00000486204 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
SSR4-211ENST00000486204 ZBTB40Q9NUA8 1239 aa16.07■□□□□ 0.16
SSR4-211ENST00000486204 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
SSR4-211ENST00000486204 ECM29Q5VYK3 1845 aa16.07■□□□□ 0.16
SSR4-211ENST00000486204 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
SSR4-211ENST00000486204 SREBF2Q12772 1141 aa16.06■□□□□ 0.16
SSR4-211ENST00000486204 MKRN3Q13064 507 aaKnown RBP16.06■□□□□ 0.16
SSR4-211ENST00000486204 CEP85Q6P2H3 762 aa16.06■□□□□ 0.16
SSR4-211ENST00000486204 C15orf52Q6ZUT6 534 aaKnown RBP16.06■□□□□ 0.16
SSR4-211ENST00000486204 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
SSR4-211ENST00000486204 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
SSR4-211ENST00000486204 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
SSR4-211ENST00000486204 ZNF609O15014 1411 aa16.05■□□□□ 0.16
SSR4-211ENST00000486204 PDE8BO95263 885 aa16.05■□□□□ 0.16
SSR4-211ENST00000486204 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
SSR4-211ENST00000486204 SIL1Q9H173 461 aa16.05■□□□□ 0.16
SSR4-211ENST00000486204 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
SSR4-211ENST00000486204 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
SSR4-211ENST00000486204 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
SSR4-211ENST00000486204 UBE4AQ14139 1066 aa16.04■□□□□ 0.16
SSR4-211ENST00000486204 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
SSR4-211ENST00000486204 METTL24Q5JXM2 366 aa16.04■□□□□ 0.16
SSR4-211ENST00000486204 FGFR2P21802 821 aa16.03■□□□□ 0.16
SSR4-211ENST00000486204 KCNJ4P48050 445 aa16.03■□□□□ 0.16
SSR4-211ENST00000486204 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
SSR4-211ENST00000486204 MYO5AQ9Y4I1 1855 aaKnown RBP16.03■□□□□ 0.16
SSR4-211ENST00000486204 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
SSR4-211ENST00000486204 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
SSR4-211ENST00000486204 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.16
SSR4-211ENST00000486204 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
SSR4-211ENST00000486204 COA1Q9GZY4 146 aa16.02■□□□□ 0.16
SSR4-211ENST00000486204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.16
SSR4-211ENST00000486204 G3V3G9 751 aa16.01■□□□□ 0.15
SSR4-211ENST00000486204 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
SSR4-211ENST00000486204 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SSR4-211ENST00000486204 PODNQ7Z5L7 613 aa16.01■□□□□ 0.15
SSR4-211ENST00000486204 SIRT2Q8IXJ6 389 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms