RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 ITGA6P23229 1130 aa19.75■□□□□ 0.75
PLXNB3-208ENST00000485980 MAP3K11Q16584 847 aa19.75■□□□□ 0.75
PLXNB3-208ENST00000485980 SUPT20HL1Q3ZLR7 823 aa19.75■□□□□ 0.75
PLXNB3-208ENST00000485980 EFCC1Q9HA90 598 aa19.75■□□□□ 0.75
PLXNB3-208ENST00000485980 CD209Q9NNX6 404 aa19.75■□□□□ 0.75
PLXNB3-208ENST00000485980 PCDHAC2Q9Y5I4 1007 aa19.75■□□□□ 0.75
PLXNB3-208ENST00000485980 COL1A1P02452 1464 aaPredicted RBP19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 CLRN2A0PK11 232 aa19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 MYO1BO43795 1136 aa19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 CRHR2Q13324 411 aa19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 VEZTQ9HBM0 779 aa19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 PPP2R3BQ9Y5P8 575 aa19.74■□□□□ 0.75
PLXNB3-208ENST00000485980 H7C1W4 665 aa19.73■□□□□ 0.75
PLXNB3-208ENST00000485980 IREB2P48200 963 aaKnown RBP19.73■□□□□ 0.75
PLXNB3-208ENST00000485980 TSPYL6Q8N831 410 aa19.73■□□□□ 0.75
PLXNB3-208ENST00000485980 STK31Q9BXU1 1019 aa19.73■□□□□ 0.75
PLXNB3-208ENST00000485980 RBM5P52756 815 aaKnown RBP eCLIP19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 SP3Q02447 781 aa19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 CHRNDQ07001 517 aa19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 CFAP100Q494V2 611 aa19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 NBPF12Q5TAG4 269 aaPredicted RBP19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 CERS5Q8N5B7 392 aa19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 TMEM106CQ9BVX2 250 aa19.72■□□□□ 0.75
PLXNB3-208ENST00000485980 UNCXA6NJT0 531 aa19.71■□□□□ 0.75
PLXNB3-208ENST00000485980 SNAP23O00161 211 aa19.71■□□□□ 0.75
PLXNB3-208ENST00000485980 MTMR14Q8NCE2 650 aa19.71■□□□□ 0.75
PLXNB3-208ENST00000485980 ARMC5Q96C12 935 aa19.71■□□□□ 0.75
PLXNB3-208ENST00000485980 SSC5DA1L4H1 1573 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 TAF5LO75529 589 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 USP2O75604 605 aaPredicted RBP19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 GJA5P36382 358 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 ANKRD13AQ8IZ07 590 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 HELBQ8NG08 1087 aaPredicted RBP19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 PRMT6Q96LA8 375 aaPredicted RBP19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 PTPN18Q99952 460 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
PLXNB3-208ENST00000485980 SPDYE2BA6NHP3 402 aa19.69■□□□□ 0.74
PLXNB3-208ENST00000485980 SPDYE6P0CI01 402 aa19.69■□□□□ 0.74
PLXNB3-208ENST00000485980 ELP3Q9H9T3 547 aa19.69■□□□□ 0.74
PLXNB3-208ENST00000485980 ANKRD18BA2A2Z9 1011 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 FXR1P51114 621 aaKnown RBP eCLIP19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 GCKRQ14397 625 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 RASA3Q14644 834 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 G2E3Q7L622 706 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 ZNF804AQ7Z570 1209 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 OPTNQ96CV9 577 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 PLA2G12BQ9BX93 195 aa19.68■□□□□ 0.74
PLXNB3-208ENST00000485980 RBBP6Q7Z6E9 1792 aaKnown RBP19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 SLC4A2P04920 1241 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 CSF1RP07333 972 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 CAP1Q01518 475 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 SLC4A8Q2Y0W8 1093 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 NBPF11Q86T75 865 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 TSR2Q969E8 191 aaKnown RBP19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 AOX1Q06278 1338 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
PLXNB3-208ENST00000485980 TESPA1A2RU30 521 aaPredicted RBP19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 MYCP01106 439 aaPredicted RBP19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 ARHGEF6Q15052 776 aa19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 COLQQ9Y215 455 aaPredicted RBP19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 CHMP3Q9Y3E7 222 aa19.66■□□□□ 0.74
PLXNB3-208ENST00000485980 BRCA2P51587 3418 aa19.65■□□□□ 0.74
PLXNB3-208ENST00000485980 IL1R1P14778 569 aa19.65■□□□□ 0.74
PLXNB3-208ENST00000485980 ZNF333Q96JL9 665 aa19.65■□□□□ 0.74
PLXNB3-208ENST00000485980 PLIN1O60240 522 aa19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 CASP7P55210 303 aa19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 FKBP1AP62942 108 aaKnown RBP19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 IFIT5Q13325 482 aaKnown RBP19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 TAF1CQ15572 869 aaPredicted RBP19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 ZFYVE28Q9HCC9 887 aa19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 PTCH2Q9Y6C5 1203 aa19.64■□□□□ 0.73
PLXNB3-208ENST00000485980 LAMB1P07942 1786 aa19.63■□□□□ 0.73
PLXNB3-208ENST00000485980 IRS2Q9Y4H2 1338 aa19.63■□□□□ 0.73
PLXNB3-208ENST00000485980 TNFAIP1Q13829 316 aa19.63■□□□□ 0.73
PLXNB3-208ENST00000485980 CCDC27Q2M243 656 aa19.63■□□□□ 0.73
PLXNB3-208ENST00000485980 TWISTNBQ3B726 338 aaPredicted RBP19.63■□□□□ 0.73
PLXNB3-208ENST00000485980 SALL2Q9Y467 1007 aaPredicted RBP19.63■□□□□ 0.73
PLXNB3-208ENST00000485980 CCL15-CCL14A0A0B4J2E2 113 aa19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 FKBP5Q13451 457 aaPredicted RBP19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 CCL15Q16663 113 aa19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 MS4A4AQ96JQ5 239 aa19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 TDRD3Q9H7E2 651 aaKnown RBP19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 ZNF70Q9UC06 446 aaPredicted RBP19.62■□□□□ 0.73
PLXNB3-208ENST00000485980 GTF2A2P52657 109 aa19.61■□□□□ 0.73
PLXNB3-208ENST00000485980 FLIIQ13045 1269 aa19.61■□□□□ 0.73
PLXNB3-208ENST00000485980 LINS1Q8NG48 757 aa19.61■□□□□ 0.73
PLXNB3-208ENST00000485980 DNAAF4Q8WXU2 420 aa19.61■□□□□ 0.73
PLXNB3-208ENST00000485980 TCP10L2B9ZVM9 353 aa19.6■□□□□ 0.73
PLXNB3-208ENST00000485980 SPDYE2Q495Y8 402 aa19.6■□□□□ 0.73
PLXNB3-208ENST00000485980 NCBP3Q53F19 620 aaKnown RBP19.6■□□□□ 0.73
PLXNB3-208ENST00000485980 TAF7LQ5H9L4 462 aa19.6■□□□□ 0.73
PLXNB3-208ENST00000485980 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.6■□□□□ 0.73
PLXNB3-208ENST00000485980 TTF2Q9UNY4 1162 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms