RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 H7C1D1 291 aa11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 IGHDP01880 384 aa11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 OS9Q13438 667 aaPredicted RBP11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 ZNF804AQ7Z570 1209 aa11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 TDRD7Q8NHU6 1098 aaKnown RBP11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 RWDD1Q9H446 243 aaPredicted RBP11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 CD209Q9NNX6 404 aa11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 PDS5AQ29RF7 1337 aaKnown RBP11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
SHROOM3-207ENST00000485780 DOCK2Q92608 1830 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 ADAMTSL1Q8N6G6 1762 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 PSMD14O00487 310 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 NEFLP07196 543 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 HIBADHP31937 336 aaKnown RBP11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 GYG1P46976 350 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 JMYQ8N9B5 988 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 XAGE2Q96GT9 111 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 LRRCC1Q9C099 1032 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 CNOT7Q9UIV1 285 aaKnown RBP11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 PCNTO95613 3336 aa11.47□□□□□ -0.57
SHROOM3-207ENST00000485780 FAM205AQ6ZU69 1335 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 ADORA1P30542 326 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 TIMM10P62072 90 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 CAVIN4Q5BKX8 364 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 CLASRPQ8N2M8 674 aaKnown RBP11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 DPF2Q92785 391 aa11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 ZNF512BQ96KM6 892 aaPredicted RBP11.46□□□□□ -0.57
SHROOM3-207ENST00000485780 MAST2Q6P0Q8 1798 aa11.46□□□□□ -0.58
SHROOM3-207ENST00000485780 MYO5AQ9Y4I1 1855 aaKnown RBP11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 SEMA3EO15041 775 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 VIL1P09327 827 aaKnown RBP11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 PHKA1P46020 1223 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 BCAMP50895 628 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 FKBP1AP62942 108 aaKnown RBP11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 TRPM4Q8TD43 1214 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 DBNDD2Q9BQY9 259 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 IL1RAPL2Q9NP60 686 aa11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 ABT1Q9ULW3 272 aaKnown RBP11.45□□□□□ -0.58
SHROOM3-207ENST00000485780 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 CNTNAP1P78357 1384 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 DACT2Q5SW24 774 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 AACSQ86V21 672 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 ZC3H15Q8WU90 426 aaKnown RBP11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 GMLQ99445 158 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 KCNQ5Q9NR82 932 aa11.44□□□□□ -0.58
SHROOM3-207ENST00000485780 MYH7P12883 1935 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 MYO3BQ8WXR4 1341 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 SALL1Q9NSC2 1324 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 SHTN1A0MZ66 631 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 TRAF5O00463 557 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 HSPA1AP0DMV8 641 aaKnown RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 HSPA1BP0DMV9 641 aaKnown RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 NUCB1Q02818 461 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 RASGRF1Q13972 1273 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 TBC1D10BQ4KMP7 808 aaPredicted RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 VPS37DQ86XT2 251 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 NEUROD6Q96NK8 337 aa11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 GLIS2Q9BZE0 524 aaPredicted RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
SHROOM3-207ENST00000485780 APBB1O00213 710 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 SMARCA5O60264 1052 aaPredicted RBP11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 UQCRFS1P1P0C7P4 283 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 MCAMP43121 646 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 HIRAP54198 1017 aaPredicted RBP11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 DEFB115Q30KQ5 88 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 TTLL5Q6EMB2 1281 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 RSBN1LQ6PCB5 846 aaPredicted RBP11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 CDC37L1Q7L3B6 337 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 CERS5Q8N5B7 392 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 AGBL3Q8NEM8 1001 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
SHROOM3-207ENST00000485780 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 CELF2O95319 508 aaKnown RBP11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 IFIT2P09913 472 aaKnown RBP11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 VEGFBP49765 207 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 MMP14P50281 582 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 GTF2IP78347 998 aa11.41□□□□□ -0.58
SHROOM3-207ENST00000485780 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms