RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 ERVK-9P63128 1117 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 RBM10P98175 930 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 KCNMA1Q12791 1236 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 FKBP5Q13451 457 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 GGT6Q6P531 493 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 RNF217Q8TC41 542 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 ESYT1Q9BSJ8 1104 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 FAM13BQ9NYF5 915 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 CABP1Q9NZU7 370 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 STAP2Q9UGK3 403 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 NSFL1CQ9UNZ2 370 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 WDR33Q9C0J8 1336 aaKnown RBP5.65□□□□□ -1.51
SMARCC1-206ENST00000485737 MAP2P11137 1827 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 RAD21O60216 631 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 MYCP01106 439 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 TPM3P06753 285 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 HMOX1P09601 288 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 CCT4P50991 539 aaKnown RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 FOXK2Q01167 660 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 DMTNQ08495 405 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 SEMA3FQ13275 785 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 SAFB2Q14151 953 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 WASHC4Q2M389 1173 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 CCDC183Q5T5S1 534 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 PRICKLE2Q7Z3G6 844 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 CYP2U1Q7Z449 544 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 RNF135Q8IUD6 432 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 C16orf71Q8IYS4 520 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 KDF1Q8NAX2 398 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 SIRT1Q96EB6 747 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 NLRP3Q96P20 1036 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 CCDC85AQ96PX6 553 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 MEIS3Q99687 375 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 STK26Q9P289 416 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 DOLKQ9UPQ8 538 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 SOS1Q07889 1333 aaPredicted RBP5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 USP31Q70CQ4 1352 aa5.64□□□□□ -1.51
SMARCC1-206ENST00000485737 PEAK1Q9H792 1746 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 A0A1W2PRU2 124 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 SMARCA5O60264 1052 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 PTMAP06454 111 aaKnown RBP5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 NEK4P51957 841 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 SLC27A3Q5K4L6 730 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 FOXD4L5Q5VV16 416 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 CCDC155Q8N6L0 562 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 POM121Q96HA1 1249 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 FUCA2Q9BTY2 467 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 CDCA7Q9BWT1 371 aaPredicted RBP5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 SRCIN1Q9C0H9 1055 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 ARHGEF10LQ9HCE6 1279 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 RAB6BQ9NRW1 208 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 KDRP35968 1356 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 DIP2AQ14689 1571 aa5.63□□□□□ -1.51
SMARCC1-206ENST00000485737 CDC14CA4D256 554 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 WASLO00401 505 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 ELL2O00472 640 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 RHOQP17081 205 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 MX1P20591 662 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 CHMLP26374 656 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 HSPA4P34932 840 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 UBE2HP62256 183 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 FLIIQ13045 1269 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 TMEM132AQ24JP5 1023 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 LYSMD3Q7Z3D4 306 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 NME9Q86XW9 330 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 RNF214Q8ND24 703 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 COG3Q96JB2 828 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 GTPBP4Q9BZE4 634 aaKnown RBP5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 USP25Q9UHP3 1055 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 PALD1Q9ULE6 856 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 TTC21BQ7Z4L5 1316 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 RAD50Q92878 1312 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 ADGRL3Q9HAR2 1447 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 FMN2Q9NZ56 1722 aa5.62□□□□□ -1.51
SMARCC1-206ENST00000485737 FAM83GA6ND36 823 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 GADD45BO75293 160 aaPredicted RBP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 GNAI2P04899 355 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 GNAI3P08754 354 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 ZSCAN22P10073 491 aaPredicted RBP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 ZSCAN20P17040 1043 aaPredicted RBP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 EIF4A2Q14240 407 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 NOLC1Q14978 699 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 SYCP1Q15431 976 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 KRT24Q2M2I5 525 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 TSGA10IPQ3SY00 556 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 AK9Q5TCS8 1911 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 CCDC171Q6TFL3 1326 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 CFAP65Q6ZU64 1925 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 USP54Q70EL1 1684 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 USP48Q86UV5 1035 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 ANKRD7Q92527 254 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 CHAMP1Q96JM3 812 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 TTC14Q96N46 770 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 USP42Q9H9J4 1324 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 KIF3AQ9Y496 699 aa5.61□□□□□ -1.51
SMARCC1-206ENST00000485737 ATP6V1DQ9Y5K8 247 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms