RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SPATA5Q8NB90 893 aa19.33■□□□□ 0.68
APOE-205ENST00000485628 DENND2AQ9ULE3 1009 aa19.33■□□□□ 0.68
APOE-205ENST00000485628 FZD9O00144 591 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 ECE2O60344 883 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 CYP2E1P05181 493 aaPredicted RBP19.32■□□□□ 0.68
APOE-205ENST00000485628 LMNB1P20700 586 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 BOLA2Q9H3K6 86 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 DBNDD1Q9H9R9 158 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 DOCK2Q92608 1830 aa19.32■□□□□ 0.68
APOE-205ENST00000485628 MYO5AQ9Y4I1 1855 aaKnown RBP19.31■□□□□ 0.68
APOE-205ENST00000485628 ZAP70P43403 619 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 RGS3P49796 1198 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 GPR162Q16538 588 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 LARGE2Q8N3Y3 721 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 BCL11AQ9H165 835 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 ZNRF3Q9ULT6 936 aa19.31■□□□□ 0.68
APOE-205ENST00000485628 FKBP1AP62942 108 aaKnown RBP19.3■□□□□ 0.68
APOE-205ENST00000485628 TICAM2Q86XR7 235 aa19.3■□□□□ 0.68
APOE-205ENST00000485628 IQSEC3Q9UPP2 1182 aaPredicted RBP19.3■□□□□ 0.68
APOE-205ENST00000485628 IGSF3O75054 1194 aa19.29■□□□□ 0.68
APOE-205ENST00000485628 STRIP1Q5VSL9 837 aa19.29■□□□□ 0.68
APOE-205ENST00000485628 EDC3Q96F86 508 aaKnown RBP19.29■□□□□ 0.68
APOE-205ENST00000485628 ANTXR1Q9H6X2 564 aa19.29■□□□□ 0.68
APOE-205ENST00000485628 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
APOE-205ENST00000485628 VIL1P09327 827 aaKnown RBP19.28■□□□□ 0.68
APOE-205ENST00000485628 DACT2Q5SW24 774 aa19.28■□□□□ 0.68
APOE-205ENST00000485628 WDR66Q8TBY9 1149 aa19.28■□□□□ 0.68
APOE-205ENST00000485628 PIH1D3Q9NQM4 214 aaKnown RBP19.28■□□□□ 0.68
APOE-205ENST00000485628 SNRKQ9NRH2 765 aa19.28■□□□□ 0.68
APOE-205ENST00000485628 PAG1Q9NWQ8 432 aa19.28■□□□□ 0.68
APOE-205ENST00000485628 SDSP20132 328 aa19.27■□□□□ 0.68
APOE-205ENST00000485628 TTLL5Q6EMB2 1281 aa19.27■□□□□ 0.68
APOE-205ENST00000485628 NIM1KQ8IY84 436 aa19.27■□□□□ 0.68
APOE-205ENST00000485628 PELP1Q8IZL8 1130 aaKnown RBP19.27■□□□□ 0.68
APOE-205ENST00000485628 CERS5Q8N5B7 392 aa19.27■□□□□ 0.68
APOE-205ENST00000485628 EVI5LQ96CN4 794 aa19.27■□□□□ 0.68
APOE-205ENST00000485628 GMLQ99445 158 aa19.27■□□□□ 0.68
APOE-205ENST00000485628 USP17L3A6NCW0 530 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 USP17L4A6NCW7 530 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 GTF2IP78347 998 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 CXCL9Q07325 125 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 USP17L1Q7RTZ2 530 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 KBTBD3Q8NAB2 608 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 ZNF384Q8TF68 577 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 JDP2Q8WYK2 163 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 SUGT1Q9Y2Z0 365 aa19.26■□□□□ 0.67
APOE-205ENST00000485628 TTF1Q15361 905 aaPredicted RBP19.25■□□□□ 0.67
APOE-205ENST00000485628 TBC1D9Q6ZT07 1266 aa19.25■□□□□ 0.67
APOE-205ENST00000485628 TBC1D22AQ8WUA7 517 aa19.25■□□□□ 0.67
APOE-205ENST00000485628 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
APOE-205ENST00000485628 MYH7P12883 1935 aa19.25■□□□□ 0.67
APOE-205ENST00000485628 AK9Q5TCS8 1911 aa19.25■□□□□ 0.67
APOE-205ENST00000485628 RFX7Q2KHR2 1363 aa19.24■□□□□ 0.67
APOE-205ENST00000485628 GOLIM4O00461 696 aa19.24■□□□□ 0.67
APOE-205ENST00000485628 GRIK5Q16478 980 aa19.24■□□□□ 0.67
APOE-205ENST00000485628 TIAM2Q8IVF5 1701 aa19.24■□□□□ 0.67
APOE-205ENST00000485628 ZC3H4Q9UPT8 1303 aaKnown RBP19.24■□□□□ 0.67
APOE-205ENST00000485628 G3V3G9 751 aa19.23■□□□□ 0.67
APOE-205ENST00000485628 PSMD14O00487 310 aa19.23■□□□□ 0.67
APOE-205ENST00000485628 FRAT2O75474 233 aaPredicted RBP19.23■□□□□ 0.67
APOE-205ENST00000485628 MAP4K4O95819 1239 aaPredicted RBP19.23■□□□□ 0.67
APOE-205ENST00000485628 MFSD14BQ5SR56 506 aa19.23■□□□□ 0.67
APOE-205ENST00000485628 DCAF8Q5TAQ9 597 aa19.23■□□□□ 0.67
APOE-205ENST00000485628 C9orf131Q5VYM1 1079 aa19.23■□□□□ 0.67
APOE-205ENST00000485628 TMED8Q6PL24 325 aaPredicted RBP19.23■□□□□ 0.67
APOE-205ENST00000485628 MRIQ9BWK5 157 aa19.23■□□□□ 0.67
APOE-205ENST00000485628 TCRBV5S4A2TA0A5A2 114 aa19.22■□□□□ 0.67
APOE-205ENST00000485628 PRDX5P30044 214 aa19.22■□□□□ 0.67
APOE-205ENST00000485628 CHAF1AQ13111 956 aaPredicted RBP19.22■□□□□ 0.67
APOE-205ENST00000485628 RSBN1LQ6PCB5 846 aaPredicted RBP19.22■□□□□ 0.67
APOE-205ENST00000485628 CNTROBQ8N137 903 aa19.22■□□□□ 0.67
APOE-205ENST00000485628 ZGPATQ8N5A5 531 aaKnown RBP19.22■□□□□ 0.67
APOE-205ENST00000485628 MXD3Q9BW11 206 aa19.22■□□□□ 0.67
APOE-205ENST00000485628 RNF181Q9P0P0 153 aa19.22■□□□□ 0.67
APOE-205ENST00000485628 JAG2Q9Y219 1238 aa19.22■□□□□ 0.67
APOE-205ENST00000485628 RAD17O75943 681 aa19.21■□□□□ 0.67
APOE-205ENST00000485628 CIAPIN1Q6FI81 312 aa19.21■□□□□ 0.67
APOE-205ENST00000485628 NSUN4Q96CB9 384 aaKnown RBP19.21■□□□□ 0.67
APOE-205ENST00000485628 FAM163AQ96GL9 167 aaPredicted RBP19.21■□□□□ 0.67
APOE-205ENST00000485628 ZNF541Q9H0D2 1346 aa19.21■□□□□ 0.67
APOE-205ENST00000485628 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
APOE-205ENST00000485628 TNIP1Q15025 636 aa19.2■□□□□ 0.66
APOE-205ENST00000485628 SPTY2D1Q68D10 685 aaPredicted RBP19.2■□□□□ 0.66
APOE-205ENST00000485628 AGBL3Q8NEM8 1001 aa19.2■□□□□ 0.66
APOE-205ENST00000485628 MYO3BQ8WXR4 1341 aa19.2■□□□□ 0.66
APOE-205ENST00000485628 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
APOE-205ENST00000485628 CHGBP05060 677 aa19.19■□□□□ 0.66
APOE-205ENST00000485628 ADD2P35612 726 aa19.19■□□□□ 0.66
APOE-205ENST00000485628 EIF6P56537 245 aaKnown RBP19.19■□□□□ 0.66
APOE-205ENST00000485628 UBE3CQ15386 1083 aa19.19■□□□□ 0.66
APOE-205ENST00000485628 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
APOE-205ENST00000485628 DPF2Q92785 391 aa19.19■□□□□ 0.66
APOE-205ENST00000485628 LDHBP07195 334 aaKnown RBP19.18■□□□□ 0.66
APOE-205ENST00000485628 PDE6AP16499 860 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 RPS12P25398 132 aaKnown RBP19.18■□□□□ 0.66
APOE-205ENST00000485628 CHMLP26374 656 aa19.18■□□□□ 0.66
APOE-205ENST00000485628 MMP14P50281 582 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 287.1 ms