RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
CLRN1-206ENST00000485607 ARFGEF1Q9Y6D6 1849 aa9.91□□□□□ -0.82
CLRN1-206ENST00000485607 PRAMEF22A3QJZ6 481 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 FIGNL2A6NMB9 653 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 A1BGP04217 495 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 U2AF1L5P0DN76 240 aaPredicted RBP9.9□□□□□ -0.82
CLRN1-206ENST00000485607 HSPA6P17066 643 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 PIP4K2AP48426 406 aaPredicted RBP9.9□□□□□ -0.82
CLRN1-206ENST00000485607 PRELPP51888 382 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 U2AF1Q01081 240 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLRN1-206ENST00000485607 RASSF7Q02833 373 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 DCTN1Q14203 1278 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.9□□□□□ -0.82
CLRN1-206ENST00000485607 TBC1D9BQ66K14 1250 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 MCM10Q7L590 875 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
CLRN1-206ENST00000485607 AFDNP55196 1824 aaKnown RBP9.9□□□□□ -0.82
CLRN1-206ENST00000485607 TTLL8A6PVC2 850 aa9.89□□□□□ -0.83
CLRN1-206ENST00000485607 BTBD11A6QL63 1104 aa9.89□□□□□ -0.83
CLRN1-206ENST00000485607 SUZ12Q15022 739 aaKnown RBP9.89□□□□□ -0.83
CLRN1-206ENST00000485607 TMEM151AQ8N4L1 468 aa9.89□□□□□ -0.83
CLRN1-206ENST00000485607 FMNL2Q96PY5 1086 aa9.89□□□□□ -0.83
CLRN1-206ENST00000485607 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
CLRN1-206ENST00000485607 CAMTA2O94983 1202 aa9.88□□□□□ -0.83
CLRN1-206ENST00000485607 IL6STP40189 918 aaPredicted RBP9.88□□□□□ -0.83
CLRN1-206ENST00000485607 C2CD5Q86YS7 1000 aa9.88□□□□□ -0.83
CLRN1-206ENST00000485607 CCDC116Q8IYX3 515 aa9.88□□□□□ -0.83
CLRN1-206ENST00000485607 NUDCQ9Y266 331 aa9.88□□□□□ -0.83
CLRN1-206ENST00000485607 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
CLRN1-206ENST00000485607 A0A087WZG4 1122 aa9.87□□□□□ -0.83
CLRN1-206ENST00000485607 TRIM66O15016 1216 aa9.87□□□□□ -0.83
CLRN1-206ENST00000485607 GDF11O95390 407 aa9.87□□□□□ -0.83
CLRN1-206ENST00000485607 PRR5LQ6MZQ0 368 aa9.87□□□□□ -0.83
CLRN1-206ENST00000485607 GPR161Q8N6U8 529 aaKnown RBP9.87□□□□□ -0.83
CLRN1-206ENST00000485607 HELBQ8NG08 1087 aaPredicted RBP9.87□□□□□ -0.83
CLRN1-206ENST00000485607 TEX13AQ9BXU3 409 aaPredicted RBP9.87□□□□□ -0.83
CLRN1-206ENST00000485607 DLEC1Q9Y238 1755 aa9.87□□□□□ -0.83
CLRN1-206ENST00000485607 COL11A2P13942 1736 aaPredicted RBP9.87□□□□□ -0.83
CLRN1-206ENST00000485607 ANKRD31Q8N7Z5 1873 aa9.87□□□□□ -0.83
CLRN1-206ENST00000485607 LOC100996750A0A140TA64 210 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 NFKBIEO00221 500 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 TOMM70O94826 608 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 PTSQ03393 145 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 QPCTQ16769 361 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 NBPF10Q6P3W6 841 aaKnown RBP9.86□□□□□ -0.83
CLRN1-206ENST00000485607 NBPF15Q8N660 670 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 KRTAP4-6Q9BYQ5 205 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 LIMD1Q9UGP4 676 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 MAP4K5Q9Y4K4 846 aa9.86□□□□□ -0.83
CLRN1-206ENST00000485607 H0YIN7 160 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
CLRN1-206ENST00000485607 TTLL6Q8N841 843 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 RTF1Q92541 710 aaKnown RBP9.85□□□□□ -0.83
CLRN1-206ENST00000485607 BRIP1Q9BX63 1249 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 C1QTNF2Q9BXJ5 285 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 ADAMTS8Q9UP79 889 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 BCORQ6W2J9 1755 aa9.85□□□□□ -0.83
CLRN1-206ENST00000485607 RNF225M0QZC1 329 aaPredicted RBP9.84□□□□□ -0.83
CLRN1-206ENST00000485607 SNRPA1P09661 255 aaKnown RBP9.84□□□□□ -0.83
CLRN1-206ENST00000485607 SH3RF1Q7Z6J0 888 aa9.84□□□□□ -0.83
CLRN1-206ENST00000485607 CNBD1Q8NA66 436 aa9.84□□□□□ -0.83
CLRN1-206ENST00000485607 THUMPD2Q9BTF0 503 aaKnown RBP9.84□□□□□ -0.83
CLRN1-206ENST00000485607 COL25A1Q9BXS0 654 aaPredicted RBP9.84□□□□□ -0.83
CLRN1-206ENST00000485607 RRAGCQ9HB90 399 aa9.84□□□□□ -0.83
CLRN1-206ENST00000485607 KDM2BQ8NHM5 1336 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 C21orf2O43822 256 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 LMNB1P20700 586 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 HTRA3P83110 453 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 KRT76Q01546 638 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 CBLBQ13191 982 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
CLRN1-206ENST00000485607 PLEKHF1Q96S99 279 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 SETDB2Q96T68 719 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 SBF1O95248 1867 aa9.83□□□□□ -0.84
CLRN1-206ENST00000485607 TIAM2Q8IVF5 1701 aa9.82□□□□□ -0.84
CLRN1-206ENST00000485607 HTATSF1O43719 755 aaKnown RBP9.82□□□□□ -0.84
CLRN1-206ENST00000485607 LILRB3O75022 631 aa9.82□□□□□ -0.84
CLRN1-206ENST00000485607 PDE6BP35913 854 aa9.82□□□□□ -0.84
CLRN1-206ENST00000485607 TAF7Q15545 349 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-206ENST00000485607 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
CLRN1-206ENST00000485607 SH3BP5LQ7L8J4 393 aa9.82□□□□□ -0.84
CLRN1-206ENST00000485607 TRMT44Q8IYL2 757 aaKnown RBP9.82□□□□□ -0.84
CLRN1-206ENST00000485607 SVOPQ8N4V2 548 aa9.82□□□□□ -0.84
CLRN1-206ENST00000485607 DNAJC5GQ8N7S2 189 aa9.82□□□□□ -0.84
CLRN1-206ENST00000485607 TNRC6CQ9HCJ0 1690 aaKnown RBP9.81□□□□□ -0.84
CLRN1-206ENST00000485607 CDC14CA4D256 554 aa9.81□□□□□ -0.84
CLRN1-206ENST00000485607 SRGNP10124 158 aa9.81□□□□□ -0.84
CLRN1-206ENST00000485607 NFE2L2Q16236 605 aa9.81□□□□□ -0.84
CLRN1-206ENST00000485607 HLFQ16534 295 aa9.81□□□□□ -0.84
CLRN1-206ENST00000485607 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
CLRN1-206ENST00000485607 PRPF40BQ6NWY9 871 aaKnown RBP9.81□□□□□ -0.84
CLRN1-206ENST00000485607 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
CLRN1-206ENST00000485607 C16orf71Q8IYS4 520 aaPredicted RBP9.81□□□□□ -0.84
CLRN1-206ENST00000485607 CCDC155Q8N6L0 562 aa9.81□□□□□ -0.84
CLRN1-206ENST00000485607 ZC3H4Q9UPT8 1303 aaKnown RBP9.81□□□□□ -0.84
CLRN1-206ENST00000485607 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
CLRN1-206ENST00000485607 GLTPD2A6NH11 291 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms