RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 MTMR14Q8NCE2 650 aa17.49■□□□□ 0.39
SMARCD3-211ENST00000485592 SLC10A4Q96EP9 437 aa17.49■□□□□ 0.39
SMARCD3-211ENST00000485592 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
SMARCD3-211ENST00000485592 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 LAMB1P07942 1786 aa17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 TAF5LO75529 589 aa17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 INHBEP58166 350 aa17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-211ENST00000485592 F8W031 263 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 SNAP23O00161 211 aa17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 ZBTB48P10074 688 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 FKBP1AP62942 108 aaKnown RBP17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 CFAP100Q494V2 611 aa17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 CERS5Q8N5B7 392 aa17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 HELBQ8NG08 1087 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 FZD1Q9UP38 647 aa17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 IRS2Q9Y4H2 1338 aa17.47■□□□□ 0.39
SMARCD3-211ENST00000485592 UNCXA6NJT0 531 aa17.46■□□□□ 0.39
SMARCD3-211ENST00000485592 IL1R1P14778 569 aa17.46■□□□□ 0.39
SMARCD3-211ENST00000485592 SUPT20HL1Q3ZLR7 823 aa17.46■□□□□ 0.39
SMARCD3-211ENST00000485592 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
SMARCD3-211ENST00000485592 IFNL1Q8IU54 200 aa17.46■□□□□ 0.39
SMARCD3-211ENST00000485592 VEZTQ9HBM0 779 aa17.46■□□□□ 0.39
SMARCD3-211ENST00000485592 SSC5DA1L4H1 1573 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 CLRN2A0PK11 232 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 SPDYE2BA6NHP3 402 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 SPDYE6P0CI01 402 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 IREB2P48200 963 aaKnown RBP17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 FOXO4P98177 505 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 WNK4Q96J92 1243 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 R3HDMLQ9H3Y0 253 aa17.45■□□□□ 0.38
SMARCD3-211ENST00000485592 VAMP4O75379 141 aa17.44■□□□□ 0.38
SMARCD3-211ENST00000485592 PCDHAC2Q9Y5I4 1007 aa17.44■□□□□ 0.38
SMARCD3-211ENST00000485592 PLIN1O60240 522 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 OTUD7BQ6GQQ9 843 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 LMBR1LQ6UX01 489 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 CNNM1Q9NRU3 951 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 JAG2Q9Y219 1238 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
SMARCD3-211ENST00000485592 ARAP2Q8WZ64 1704 aa17.42■□□□□ 0.38
SMARCD3-211ENST00000485592 F6X3S4 739 aa17.42■□□□□ 0.38
SMARCD3-211ENST00000485592 EXOSC9Q06265 439 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-211ENST00000485592 TNFAIP1Q13829 316 aa17.42■□□□□ 0.38
SMARCD3-211ENST00000485592 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
SMARCD3-211ENST00000485592 PRMT6Q96LA8 375 aaPredicted RBP17.42■□□□□ 0.38
SMARCD3-211ENST00000485592 GRM8O00222 908 aa17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 IGF2BP3O00425 579 aaKnown RBP eCLIP17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 NBPF12Q5TAG4 269 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 OTOP1Q7RTM1 612 aa17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 ERO1AQ96HE7 468 aa17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 ZNF594Q96JF6 807 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 SALL2Q9Y467 1007 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-211ENST00000485592 OTOFQ9HC10 1997 aa17.4■□□□□ 0.38
SMARCD3-211ENST00000485592 RASA3Q14644 834 aa17.4■□□□□ 0.38
SMARCD3-211ENST00000485592 MFSD14BQ5SR56 506 aa17.4■□□□□ 0.38
SMARCD3-211ENST00000485592 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
SMARCD3-211ENST00000485592 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
SMARCD3-211ENST00000485592 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
SMARCD3-211ENST00000485592 USP2O75604 605 aaPredicted RBP17.39■□□□□ 0.37
SMARCD3-211ENST00000485592 UBE4AQ14139 1066 aa17.39■□□□□ 0.37
SMARCD3-211ENST00000485592 EPHA10Q5JZY3 1008 aa17.39■□□□□ 0.37
SMARCD3-211ENST00000485592 SERPINA10Q9UK55 444 aa17.39■□□□□ 0.37
SMARCD3-211ENST00000485592 FAM205AQ6ZU69 1335 aa17.39■□□□□ 0.37
SMARCD3-211ENST00000485592 TTF2Q9UNY4 1162 aaKnown RBP17.38■□□□□ 0.37
SMARCD3-211ENST00000485592 AOX1Q06278 1338 aa17.38■□□□□ 0.37
SMARCD3-211ENST00000485592 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 ALDH1L1O75891 902 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 HIBADHP31937 336 aaKnown RBP17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 GJA5P36382 358 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 TNNI2P48788 182 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 CRHR2Q13324 411 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 SLC4A10Q6U841 1118 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 TDRD7Q8NHU6 1098 aaKnown RBP17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 CD99L2Q8TCZ2 262 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 OPTNQ96CV9 577 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 ELP3Q9H9T3 547 aa17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 ZNF70Q9UC06 446 aaPredicted RBP17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 RBBP6Q7Z6E9 1792 aaKnown RBP17.37■□□□□ 0.37
SMARCD3-211ENST00000485592 TESPA1A2RU30 521 aaPredicted RBP17.36■□□□□ 0.37
SMARCD3-211ENST00000485592 GYG1P46976 350 aa17.36■□□□□ 0.37
SMARCD3-211ENST00000485592 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
SMARCD3-211ENST00000485592 TDRD3Q9H7E2 651 aaKnown RBP17.36■□□□□ 0.37
SMARCD3-211ENST00000485592 EFCC1Q9HA90 598 aa17.36■□□□□ 0.37
SMARCD3-211ENST00000485592 PTPN22Q9Y2R2 807 aa17.36■□□□□ 0.37
SMARCD3-211ENST00000485592 SP3Q02447 781 aa17.35■□□□□ 0.37
SMARCD3-211ENST00000485592 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
SMARCD3-211ENST00000485592 DZIP1LQ8IYY4 767 aaKnown RBP17.35■□□□□ 0.37
SMARCD3-211ENST00000485592 TCP10L2B9ZVM9 353 aa17.34■□□□□ 0.37
SMARCD3-211ENST00000485592 CRKP46108 304 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms