RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 TRAIPQ9BWF2 469 aa6.24□□□□□ -1.41
SFPQ-209ENST00000485454 A0A1W2PP55 124 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 ARL4DP49703 201 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.23□□□□□ -1.41
SFPQ-209ENST00000485454 SLC7A3Q8WY07 619 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 ALKBH8Q96BT7 664 aaKnown RBP6.23□□□□□ -1.41
SFPQ-209ENST00000485454 NIF3L1Q9GZT8 377 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 DNAJC25Q9H1X3 360 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 KCNK4Q9NYG8 393 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 DCTN4Q9UJW0 460 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 IVNS1ABPQ9Y6Y0 642 aa6.23□□□□□ -1.41
SFPQ-209ENST00000485454 DDX3YO15523 660 aaKnown RBP6.22□□□□□ -1.41
SFPQ-209ENST00000485454 WISP1O95388 367 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 LRP8Q14114 963 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 IKBKEQ14164 716 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 KIAA0319Q5VV43 1072 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 ACAD11Q709F0 780 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 VN1R5Q7Z5H4 357 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 DZIP1LQ8IYY4 767 aaKnown RBP6.22□□□□□ -1.41
SFPQ-209ENST00000485454 AGGF1Q8N302 714 aaeCLIP6.22□□□□□ -1.41
SFPQ-209ENST00000485454 FOXD4L4Q8WXT5 416 aaPredicted RBP6.22□□□□□ -1.41
SFPQ-209ENST00000485454 LIN7BQ9HAP6 207 aa6.22□□□□□ -1.41
SFPQ-209ENST00000485454 METTL12A8MUP2 240 aa6.21□□□□□ -1.42
SFPQ-209ENST00000485454 SOX1O00570 391 aaPredicted RBP6.21□□□□□ -1.42
SFPQ-209ENST00000485454 EIF1AYO14602 144 aaKnown RBP6.21□□□□□ -1.42
SFPQ-209ENST00000485454 ADAM11O75078 769 aa6.21□□□□□ -1.42
SFPQ-209ENST00000485454 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
SFPQ-209ENST00000485454 Q6ZS46 218 aa6.21□□□□□ -1.42
SFPQ-209ENST00000485454 CCNJLQ8IV13 435 aa6.21□□□□□ -1.42
SFPQ-209ENST00000485454 A0A096LPE4 126 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 A0A1W2PPZ6 126 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 GLB1P16278 677 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 MAPK1P28482 360 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 HGSNATQ68CP4 663 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 KIAA1211Q6ZU35 1233 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 TMC7Q7Z402 723 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 UBASH3BQ8TF42 649 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 CCDC74AQ96AQ1 378 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 CSRNP1Q96S65 589 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 TCF12Q99081 682 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 SOX17Q9H6I2 414 aaPredicted RBP6.2□□□□□ -1.42
SFPQ-209ENST00000485454 NPHS2Q9NP85 383 aa6.2□□□□□ -1.42
SFPQ-209ENST00000485454 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
SFPQ-209ENST00000485454 ESRRAP11474 423 aaPredicted RBP6.19□□□□□ -1.42
SFPQ-209ENST00000485454 GRIA4P48058 902 aa6.19□□□□□ -1.42
SFPQ-209ENST00000485454 NLRP12P59046 1061 aa6.19□□□□□ -1.42
SFPQ-209ENST00000485454 CEP41Q9BYV8 373 aa6.19□□□□□ -1.42
SFPQ-209ENST00000485454 EHD4Q9H223 541 aa6.19□□□□□ -1.42
SFPQ-209ENST00000485454 HYAL3O43820 417 aaPredicted RBP6.18□□□□□ -1.42
SFPQ-209ENST00000485454 SPRED3Q2MJR0 410 aa6.18□□□□□ -1.42
SFPQ-209ENST00000485454 UBL7Q96S82 380 aaPredicted RBP6.18□□□□□ -1.42
SFPQ-209ENST00000485454 CLEC4MQ9H2X3 399 aaPredicted RBP6.18□□□□□ -1.42
SFPQ-209ENST00000485454 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
SFPQ-209ENST00000485454 EIF4EBP3O60516 100 aaPredicted RBP6.17□□□□□ -1.42
SFPQ-209ENST00000485454 GADD45BO75293 160 aaPredicted RBP6.17□□□□□ -1.42
SFPQ-209ENST00000485454 PLCB3Q01970 1234 aa6.17□□□□□ -1.42
SFPQ-209ENST00000485454 PCDH1Q08174 1060 aa6.17□□□□□ -1.42
SFPQ-209ENST00000485454 PRR23CQ6ZRP0 262 aa6.17□□□□□ -1.42
SFPQ-209ENST00000485454 RUSC1Q9BVN2 902 aa6.17□□□□□ -1.42
SFPQ-209ENST00000485454 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
SFPQ-209ENST00000485454 RNF208Q9H0X6 261 aa6.17□□□□□ -1.42
SFPQ-209ENST00000485454 TREHO43280 583 aa6.16□□□□□ -1.42
SFPQ-209ENST00000485454 ITPKAP23677 461 aa6.16□□□□□ -1.42
SFPQ-209ENST00000485454 GSTM4Q03013 218 aa6.16□□□□□ -1.42
SFPQ-209ENST00000485454 DSC3Q14574 896 aa6.16□□□□□ -1.42
SFPQ-209ENST00000485454 TRAK1Q9UPV9 953 aa6.16□□□□□ -1.42
SFPQ-209ENST00000485454 MEGF11A6BM72 1044 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 PTPN12Q05209 780 aaKnown RBP6.15□□□□□ -1.42
SFPQ-209ENST00000485454 ZNF423Q2M1K9 1284 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 UVSSAQ2YD98 709 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 ANKRD34AQ69YU3 496 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 PRPF40BQ6NWY9 871 aaKnown RBP6.15□□□□□ -1.42
SFPQ-209ENST00000485454 ZSCAN29Q8IWY8 852 aaPredicted RBP6.15□□□□□ -1.42
SFPQ-209ENST00000485454 EPS8L3Q8TE67 593 aaKnown RBP6.15□□□□□ -1.42
SFPQ-209ENST00000485454 FAM46AQ96IP4 442 aaKnown RBP6.15□□□□□ -1.42
SFPQ-209ENST00000485454 USP26Q9BXU7 913 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 ZNF576Q9H609 170 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 ABCB6Q9NP58 842 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 RNF112Q9ULX5 631 aa6.15□□□□□ -1.42
SFPQ-209ENST00000485454 PNMA6FA0A0J9YX94 578 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 LOC100289279A0A1B0GTE1 492 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 TMEM238LA0A1B0GVL6 79 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 DHX15O43143 795 aaKnown RBP6.14□□□□□ -1.43
SFPQ-209ENST00000485454 SART1O43290 800 aaKnown RBP6.14□□□□□ -1.43
SFPQ-209ENST00000485454 PDIA4P13667 645 aaKnown RBP6.14□□□□□ -1.43
SFPQ-209ENST00000485454 GRM2Q14416 872 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 FDX2Q6P4F2 183 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 ARMC10Q8N2F6 343 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 UTP4Q969X6 686 aaKnown RBP6.14□□□□□ -1.43
SFPQ-209ENST00000485454 ASB16Q96NS5 453 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 RAXQ9Y2V3 346 aa6.14□□□□□ -1.43
SFPQ-209ENST00000485454 ENOX2Q16206 610 aaKnown RBP6.13□□□□□ -1.43
SFPQ-209ENST00000485454 EXOSC6Q5RKV6 272 aaKnown RBP6.13□□□□□ -1.43
SFPQ-209ENST00000485454 GLIS3Q8NEA6 775 aa6.13□□□□□ -1.43
SFPQ-209ENST00000485454 DDX54Q8TDD1 881 aaKnown RBP6.13□□□□□ -1.43
SFPQ-209ENST00000485454 TMPRSS13Q9BYE2 586 aa6.13□□□□□ -1.43
SFPQ-209ENST00000485454 CYP4F12Q9HCS2 524 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms