RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ZNF511Q8NB15 262 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 NGDNQ8NEJ9 315 aaKnown RBP7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 FAM129BQ96TA1 746 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 TSPAN10Q9H1Z9 355 aaPredicted RBP7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 SPATA31A3Q5VYP0 1347 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 PXDNQ92626 1479 aa7.49□□□□□ -1.21
NHLRC3-205ENST00000485407 TOPAZ1Q8N9V7 1692 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 SCTRP47872 440 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 GDF10P55107 478 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 ARID5AQ03989 594 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 PPIP5K1Q6PFW1 1433 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 ALKBH8Q96BT7 664 aaKnown RBP7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 ZSWIM4Q9H7M6 989 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 ACEP12821 1306 aa7.48□□□□□ -1.21
NHLRC3-205ENST00000485407 ARHGEF10O15013 1369 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 GOLGB1Q14789 3259 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 TTC24A2A3L6 582 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 FAM83GA6ND36 823 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 POTECB2RU33 542 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 SKOR1P84550 965 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 COX20Q5RI15 118 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 ABTB2Q8N961 1025 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 SNIP1Q8TAD8 396 aaKnown RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 KCTD15Q96SI1 283 aaPredicted RBP7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 CYLDQ9NQC7 956 aa7.47□□□□□ -1.21
NHLRC3-205ENST00000485407 TNS3Q68CZ2 1445 aa7.46□□□□□ -1.21
NHLRC3-205ENST00000485407 A0A1W2PRU2 124 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 TNFRSF10BO14763 440 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 IGHA2P01877 340 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 GNA15P30679 374 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 SCNN1DP51172 638 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 WNT7BP56706 349 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 TBCELQ5QJ74 424 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 SOGA3Q5TF21 947 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 SDE2Q6IQ49 451 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 VPS37DQ86XT2 251 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 ZNF654Q8IZM8 581 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 GMLQ99445 158 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 TERF2IPQ9NYB0 399 aa7.46□□□□□ -1.22
NHLRC3-205ENST00000485407 CPSF1Q10570 1443 aaKnown RBP7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 TRPM3Q9HCF6 1732 aaPredicted RBP7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 HSPA5P11021 654 aaKnown RBP7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 SMPD1P17405 629 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 CTC1Q2NKJ3 1217 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 ZNF394Q53GI3 561 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 ATCAYQ86WG3 371 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 SYT17Q9BSW7 474 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 C1QTNF2Q9BXJ5 285 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 PIF1Q9H611 641 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 POLIQ9UNA4 740 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 PCDHGB7Q9Y5F8 929 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 NRKQ7Z2Y5 1582 aa7.45□□□□□ -1.22
NHLRC3-205ENST00000485407 USP6P35125 1406 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 ZBTB39O15060 712 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 INHAP05111 366 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 RBL2Q08999 1139 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 RC3H1Q5TC82 1133 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 HDGFL2Q7Z4V5 671 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 ZNF775Q96BV0 537 aaPredicted RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 CRELD1Q96HD1 420 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 DACH1Q9UI36 760 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 DDX41Q9UJV9 622 aaKnown RBP7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 TTC21AQ8NDW8 1320 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 RREB1Q92766 1687 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 ALS2Q96Q42 1657 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 SSH2Q76I76 1423 aa7.44□□□□□ -1.22
NHLRC3-205ENST00000485407 AKAP12Q02952 1782 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 J3QL48 77 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 AXIN1O15169 862 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 APBA3O96018 575 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 BRD2P25440 801 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 EPHA4P54764 986 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 FAM182BQ5T319 152 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 CC2D2BQ6DHV5 1058 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 USP48Q86UV5 1035 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 C2orf49Q9BVC5 232 aaPredicted RBP7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 FHDC1Q9C0D6 1143 aaPredicted RBP7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 SLC12A5Q9H2X9 1139 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 CHMP3Q9Y3E7 222 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 AK5Q9Y6K8 562 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 NUP188Q5SRE5 1749 aa7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 KTN1Q86UP2 1357 aaKnown RBP7.43□□□□□ -1.22
NHLRC3-205ENST00000485407 TRIM37O94972 964 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 USP5P45974 858 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms