RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 COL9A3Q14050 684 aaPredicted RBP19.91■□□□□ 0.78
CTSA-207ENST00000484855 ZSCAN31Q96LW9 406 aaPredicted RBP19.91■□□□□ 0.78
CTSA-207ENST00000484855 GBP4Q96PP9 640 aa19.91■□□□□ 0.78
CTSA-207ENST00000484855 GRAPQ13588 217 aa19.91■□□□□ 0.78
CTSA-207ENST00000484855 ANKRD1Q15327 319 aa19.91■□□□□ 0.78
CTSA-207ENST00000484855 VPS37DQ86XT2 251 aa19.91■□□□□ 0.78
CTSA-207ENST00000484855 GRAPLQ8TC17 118 aaPredicted RBP19.91■□□□□ 0.78
CTSA-207ENST00000484855 TCRBV5S4A2TA0A5A2 114 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 WTIPA6NIX2 430 aaPredicted RBP19.9■□□□□ 0.78
CTSA-207ENST00000484855 AKT1S1Q96B36 256 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 ALDH8A1Q9H2A2 487 aaPredicted RBP19.9■□□□□ 0.78
CTSA-207ENST00000484855 SH2B1Q9NRF2 756 aaPredicted RBP19.9■□□□□ 0.78
CTSA-207ENST00000484855 CTNNA3Q9UI47 895 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 FOXP2O15409 715 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 LARGE1O95461 756 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 DDR1Q08345 913 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 RPGRQ92834 1020 aaKnown RBP19.9■□□□□ 0.78
CTSA-207ENST00000484855 TCEANC2Q96MN5 208 aa19.9■□□□□ 0.78
CTSA-207ENST00000484855 IQSEC3Q9UPP2 1182 aaPredicted RBP19.9■□□□□ 0.78
CTSA-207ENST00000484855 PKP1Q13835 747 aa19.89■□□□□ 0.77
CTSA-207ENST00000484855 STOX1Q6ZVD7 989 aa19.89■□□□□ 0.77
CTSA-207ENST00000484855 MAGEB6Q8N7X4 407 aa19.89■□□□□ 0.77
CTSA-207ENST00000484855 RGS17Q9UGC6 210 aaPredicted RBP19.89■□□□□ 0.77
CTSA-207ENST00000484855 COL1A1P02452 1464 aaPredicted RBP19.89■□□□□ 0.77
CTSA-207ENST00000484855 POLRMTO00411 1230 aaKnown RBP19.88■□□□□ 0.77
CTSA-207ENST00000484855 FAM84BQ96KN1 310 aaPredicted RBP19.88■□□□□ 0.77
CTSA-207ENST00000484855 DDX11L8A8MPP1 907 aa19.88■□□□□ 0.77
CTSA-207ENST00000484855 HMGB1P09429 215 aaKnown RBP19.88■□□□□ 0.77
CTSA-207ENST00000484855 TTLL5Q6EMB2 1281 aa19.88■□□□□ 0.77
CTSA-207ENST00000484855 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
CTSA-207ENST00000484855 A0A0G2JLW4 131 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 IMMTQ16891 758 aaKnown RBP19.87■□□□□ 0.77
CTSA-207ENST00000484855 CRY2Q49AN0 593 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 AIDAQ96BJ3 306 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 ANKRD31Q8N7Z5 1873 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 NRXN2Q9P2S2 1712 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 E7EWF7 191 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 FGAP02671 866 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 KLRK1P26718 216 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
CTSA-207ENST00000484855 POTEAQ6S8J7 498 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 LRP2BPQ9P2M1 347 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 DENND2AQ9ULE3 1009 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 TPCN1Q9ULQ1 816 aa19.87■□□□□ 0.77
CTSA-207ENST00000484855 CHD4Q14839 1912 aa19.86■□□□□ 0.77
CTSA-207ENST00000484855 ME3Q16798 604 aa19.86■□□□□ 0.77
CTSA-207ENST00000484855 FBXO33Q7Z6M2 555 aa19.86■□□□□ 0.77
CTSA-207ENST00000484855 COL23A1Q86Y22 540 aaPredicted RBP19.86■□□□□ 0.77
CTSA-207ENST00000484855 CCDC83Q8IWF9 413 aa19.86■□□□□ 0.77
CTSA-207ENST00000484855 FLAD1Q8NFF5 587 aa19.85■□□□□ 0.77
CTSA-207ENST00000484855 SEMA3EO15041 775 aa19.85■□□□□ 0.77
CTSA-207ENST00000484855 RBM17Q96I25 401 aaKnown RBP19.85■□□□□ 0.77
CTSA-207ENST00000484855 CACNA1SQ13698 1873 aa19.85■□□□□ 0.77
CTSA-207ENST00000484855 CCDC88AQ3V6T2 1871 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 HAND2P61296 217 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 CLEC17AQ6ZS10 378 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 Q6ZUG5 572 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 ANKIB1Q9P2G1 1089 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 ABCF2Q9UG63 623 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 ZDHHC9Q9Y397 364 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 MBD4O95243 580 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 HIBADHP31937 336 aaKnown RBP19.84■□□□□ 0.77
CTSA-207ENST00000484855 DHX32Q7L7V1 743 aaKnown RBP19.84■□□□□ 0.77
CTSA-207ENST00000484855 NLGN1Q8N2Q7 840 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
CTSA-207ENST00000484855 SMC3Q9UQE7 1217 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 MAST2Q6P0Q8 1798 aa19.84■□□□□ 0.77
CTSA-207ENST00000484855 XDHP47989 1333 aa19.83■□□□□ 0.77
CTSA-207ENST00000484855 APPP05067 770 aa19.83■□□□□ 0.77
CTSA-207ENST00000484855 BAG4O95429 457 aaKnown RBP19.83■□□□□ 0.76
CTSA-207ENST00000484855 FGD1P98174 961 aa19.83■□□□□ 0.76
CTSA-207ENST00000484855 ST3GAL1Q11201 340 aa19.83■□□□□ 0.76
CTSA-207ENST00000484855 NECAB1Q8N987 351 aa19.83■□□□□ 0.76
CTSA-207ENST00000484855 RAI14Q9P0K7 980 aa19.83■□□□□ 0.76
CTSA-207ENST00000484855 LEMD3Q9Y2U8 911 aa19.83■□□□□ 0.76
CTSA-207ENST00000484855 PDS5AQ29RF7 1337 aaKnown RBP19.82■□□□□ 0.76
CTSA-207ENST00000484855 ZNF213O14771 459 aa19.82■□□□□ 0.76
CTSA-207ENST00000484855 BRD1O95696 1058 aa19.82■□□□□ 0.76
CTSA-207ENST00000484855 IRS2Q9Y4H2 1338 aa19.82■□□□□ 0.76
CTSA-207ENST00000484855 LRRC37AA6NMS7 1700 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 SLC51AQ86UW1 340 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 LRRC2Q9BYS8 371 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 ARMT1Q9H993 441 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 GOLGA6L22H0YM25 854 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 ZMYM6O95789 1325 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 PNPLA7Q6ZV29 1317 aa19.81■□□□□ 0.76
CTSA-207ENST00000484855 PTMSP20962 102 aa19.8■□□□□ 0.76
CTSA-207ENST00000484855 EXOSC10Q01780 885 aaKnown RBP19.8■□□□□ 0.76
CTSA-207ENST00000484855 KLRG2A4D1S0 409 aaPredicted RBP19.8■□□□□ 0.76
CTSA-207ENST00000484855 PATL2C9JE40 543 aaKnown RBP19.8■□□□□ 0.76
CTSA-207ENST00000484855 GNAT2P19087 354 aa19.8■□□□□ 0.76
CTSA-207ENST00000484855 CYP7A1P22680 504 aa19.8■□□□□ 0.76
CTSA-207ENST00000484855 GJB2P29033 226 aa19.8■□□□□ 0.76
CTSA-207ENST00000484855 HOXA10P31260 410 aaPredicted RBP19.8■□□□□ 0.76
CTSA-207ENST00000484855 FOXD4L5Q5VV16 416 aaPredicted RBP19.8■□□□□ 0.76
CTSA-207ENST00000484855 TXNRD3Q86VQ6 643 aa19.8■□□□□ 0.76
CTSA-207ENST00000484855 FOXD4L4Q8WXT5 416 aaPredicted RBP19.8■□□□□ 0.76
CTSA-207ENST00000484855 BRF1Q92994 677 aa19.8■□□□□ 0.76
CTSA-207ENST00000484855 ALX1Q15699 326 aa19.79■□□□□ 0.76
CTSA-207ENST00000484855 LCORLQ8N3X6 602 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms