RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 SPATA24Q86W54 205 aa17.19■□□□□ 0.34
RXRA-203ENST00000484822 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
RXRA-203ENST00000484822 KIF4AO95239 1232 aa17.19■□□□□ 0.34
RXRA-203ENST00000484822 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
RXRA-203ENST00000484822 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 RLBP1P12271 317 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 KSR2Q6VAB6 950 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
RXRA-203ENST00000484822 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
RXRA-203ENST00000484822 FAM76AQ8TAV0 307 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 SPAG5Q96R06 1193 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 KDM5DQ9BY66 1539 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 SPAG1Q07617 926 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 PPP4R3AQ6IN85 833 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 ALG1Q9BT22 464 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 PRC1O43663 620 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 COPS6Q7L5N1 327 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 HDXQ7Z353 690 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 DZIP1Q86YF9 867 aaKnown RBP17.18■□□□□ 0.34
RXRA-203ENST00000484822 SELENOSQ9BQE4 189 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 AK2P54819 239 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 TSC1Q92574 1164 aa17.18■□□□□ 0.34
RXRA-203ENST00000484822 ELF2Q15723 593 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 KRT86O43790 486 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 KIF5AQ12840 1032 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 STX17P56962 302 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 Q6ZUG5 572 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 IFT81Q8WYA0 676 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 LTKP29376 864 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 IFI16Q16666 785 aaKnown RBP17.17■□□□□ 0.34
RXRA-203ENST00000484822 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
RXRA-203ENST00000484822 SPTLC2O15270 562 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 MXRA7P84157 204 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 GABPB1Q06547 395 aaPredicted RBP17.16■□□□□ 0.34
RXRA-203ENST00000484822 CETN1Q12798 172 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 PYM1Q9BRP8 204 aaKnown RBP17.16■□□□□ 0.34
RXRA-203ENST00000484822 SMIM23A6NLE4 172 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 ATP6V1AP38606 617 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 CDCA7Q9BWT1 371 aaPredicted RBP17.16■□□□□ 0.34
RXRA-203ENST00000484822 EXOC1Q9NV70 894 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 TLDC2A0PJX2 215 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
RXRA-203ENST00000484822 TMEM87AQ8NBN3 555 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 PPP1R14CQ8TAE6 165 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 HDAC9Q9UKV0 1011 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 CEP83Q9Y592 693 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 PTPRTO14522 1441 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 PLXNC1O60486 1568 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 TTF1Q15361 905 aaPredicted RBP17.15■□□□□ 0.34
RXRA-203ENST00000484822 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 TRMT1LQ7Z2T5 733 aaKnown RBP17.15■□□□□ 0.34
RXRA-203ENST00000484822 ZNF444Q8N0Y2 327 aaPredicted RBP17.15■□□□□ 0.34
RXRA-203ENST00000484822 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 ARFGAP2Q8N6H7 521 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 PPM1EQ8WY54 764 aa17.15■□□□□ 0.34
RXRA-203ENST00000484822 VAV2P52735 878 aa17.14■□□□□ 0.34
RXRA-203ENST00000484822 KRT83P78385 493 aa17.14■□□□□ 0.34
RXRA-203ENST00000484822 RSRC1Q96IZ7 334 aaKnown RBP17.14■□□□□ 0.34
RXRA-203ENST00000484822 IKBKGQ9Y6K9 419 aa17.14■□□□□ 0.34
RXRA-203ENST00000484822 IL13P35225 146 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 CCDC152Q4G0S7 254 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 CCDC42Q96M95 316 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 RABEP2Q9H5N1 569 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 MMRN2Q9H8L6 949 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 C6orf229H3BNL8 230 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 GRM8O00222 908 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
RXRA-203ENST00000484822 VAMP4O75379 141 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 SELENOOQ9BVL4 669 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 ARID5AQ03989 594 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 LINS1Q8NG48 757 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 DHX58Q96C10 678 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 EFCAB6Q5THR3 1501 aa17.14■□□□□ 0.33
RXRA-203ENST00000484822 JARID2Q92833 1246 aaPredicted RBP17.14■□□□□ 0.33
RXRA-203ENST00000484822 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
RXRA-203ENST00000484822 TUBB4BP68371 445 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 INTS4Q96HW7 963 aaKnown RBP17.13■□□□□ 0.33
RXRA-203ENST00000484822 HECW2Q9P2P5 1572 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
RXRA-203ENST00000484822 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 CARD6Q9BX69 1037 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 ZBTB43O43298 467 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 ZBTB16Q05516 673 aa17.13■□□□□ 0.33
RXRA-203ENST00000484822 KRT13P13646 458 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 STAT6P42226 847 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 CUL5Q93034 780 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
RXRA-203ENST00000484822 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms