RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 RTFDC1Q9BY42 306 aaPredicted RBP24.72■■□□□ 1.55
VCPKMT-203ENST00000484763 DALRD3Q5D0E6 543 aaKnown RBP24.72■■□□□ 1.55
VCPKMT-203ENST00000484763 SOGA3Q5TF21 947 aa24.72■■□□□ 1.55
VCPKMT-203ENST00000484763 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.72■■□□□ 1.55
VCPKMT-203ENST00000484763 PIH1D3Q9NQM4 214 aaKnown RBP24.72■■□□□ 1.55
VCPKMT-203ENST00000484763 RAD50Q92878 1312 aa24.71■■□□□ 1.55
VCPKMT-203ENST00000484763 NMIQ13287 307 aaPredicted RBP24.71■■□□□ 1.55
VCPKMT-203ENST00000484763 TDRD7Q8NHU6 1098 aaKnown RBP24.71■■□□□ 1.55
VCPKMT-203ENST00000484763 ZC3H12CQ9C0D7 883 aaKnown RBP24.71■■□□□ 1.55
VCPKMT-203ENST00000484763 SGSM2O43147 1006 aa24.7■■□□□ 1.55
VCPKMT-203ENST00000484763 REC8O95072 547 aa24.7■■□□□ 1.55
VCPKMT-203ENST00000484763 WASHC4Q2M389 1173 aa24.7■■□□□ 1.55
VCPKMT-203ENST00000484763 RTKN2Q8IZC4 609 aa24.7■■□□□ 1.55
VCPKMT-203ENST00000484763 CD209Q9NNX6 404 aa24.7■■□□□ 1.55
VCPKMT-203ENST00000484763 ZFYP08048 801 aaPredicted RBP24.7■■□□□ 1.54
VCPKMT-203ENST00000484763 IL1R1P14778 569 aa24.7■■□□□ 1.54
VCPKMT-203ENST00000484763 ZSCAN25Q6NSZ9 544 aa24.7■■□□□ 1.54
VCPKMT-203ENST00000484763 SUPT20HQ8NEM7 779 aa24.7■■□□□ 1.54
VCPKMT-203ENST00000484763 FAM227BQ96M60 508 aa24.7■■□□□ 1.54
VCPKMT-203ENST00000484763 RIMBP2O15034 1052 aa24.69■■□□□ 1.54
VCPKMT-203ENST00000484763 RNF113AO15541 343 aaKnown RBP24.69■■□□□ 1.54
VCPKMT-203ENST00000484763 IDH1O75874 414 aaKnown RBP24.69■■□□□ 1.54
VCPKMT-203ENST00000484763 COA1Q9GZY4 146 aa24.69■■□□□ 1.54
VCPKMT-203ENST00000484763 A0A0D9SFI3 127 aa24.68■■□□□ 1.54
VCPKMT-203ENST00000484763 IL25Q9H293 177 aa24.68■■□□□ 1.54
VCPKMT-203ENST00000484763 MAP3K12Q12852 859 aa24.67■■□□□ 1.54
VCPKMT-203ENST00000484763 CHAF1AQ13111 956 aaPredicted RBP24.67■■□□□ 1.54
VCPKMT-203ENST00000484763 PSMD1Q99460 953 aa24.67■■□□□ 1.54
VCPKMT-203ENST00000484763 NLGN2Q8NFZ4 835 aa24.66■■□□□ 1.54
VCPKMT-203ENST00000484763 MAST2Q6P0Q8 1798 aa24.66■■□□□ 1.54
VCPKMT-203ENST00000484763 ARFGEF1Q9Y6D6 1849 aa24.66■■□□□ 1.54
VCPKMT-203ENST00000484763 CHGBP05060 677 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 ZMYM1Q5SVZ6 1142 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 SLC9C2Q5TAH2 1124 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 WDR66Q8TBY9 1149 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 ANO2Q9NQ90 1003 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 HELLSQ9NRZ9 838 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 LRP2BPQ9P2M1 347 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 ABCF2Q9UG63 623 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 ADD2P35612 726 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 WWC3Q9ULE0 1092 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 SALL1Q9NSC2 1324 aa24.65■■□□□ 1.54
VCPKMT-203ENST00000484763 FER1L6Q2WGJ9 1857 aa24.64■■□□□ 1.54
VCPKMT-203ENST00000484763 MCMDC2Q4G0Z9 681 aa24.64■■□□□ 1.54
VCPKMT-203ENST00000484763 ZGPATQ8N5A5 531 aaKnown RBP24.64■■□□□ 1.54
VCPKMT-203ENST00000484763 RBM19Q9Y4C8 960 aaKnown RBP24.64■■□□□ 1.54
VCPKMT-203ENST00000484763 CHD4Q14839 1912 aa24.64■■□□□ 1.54
VCPKMT-203ENST00000484763 CCDC88AQ3V6T2 1871 aa24.64■■□□□ 1.53
VCPKMT-203ENST00000484763 G3V3G9 751 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 PDE6AP16499 860 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 KIAA2012Q0VF49 1180 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 UBE3CQ15386 1083 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 DCAF8Q5TAQ9 597 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 APPBP2Q92624 585 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 TBC1D32Q96NH3 1257 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 C22orf23Q9BZE7 217 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 FHDC1Q9C0D6 1143 aaPredicted RBP24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 SLFNL1Q499Z3 407 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 KIAA1211Q6ZU35 1233 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 USP26Q9BXU7 913 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 BCS1LQ9Y276 419 aa24.63■■□□□ 1.53
VCPKMT-203ENST00000484763 EPB41L2O43491 1005 aaKnown RBP24.62■■□□□ 1.53
VCPKMT-203ENST00000484763 DOK7Q18PE1 504 aa24.62■■□□□ 1.53
VCPKMT-203ENST00000484763 SEC62Q99442 399 aaKnown RBP24.62■■□□□ 1.53
VCPKMT-203ENST00000484763 RAI14Q9P0K7 980 aa24.62■■□□□ 1.53
VCPKMT-203ENST00000484763 JAG2Q9Y219 1238 aa24.62■■□□□ 1.53
VCPKMT-203ENST00000484763 AOC3Q16853 763 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 SPTY2D1Q68D10 685 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 ERICH6Q7L0X2 663 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 PODNQ7Z5L7 613 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 ZNF589Q86UQ0 364 aaPredicted RBP24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 MAGEB6Q8N7X4 407 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 MAST3O60307 1309 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 ZNF532Q9HCE3 1301 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 GOLGB1Q14789 3259 aaKnown RBP24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 TCRBV5S4A2TA0A5A2 114 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 PPIP5K2O43314 1243 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 IGSF3O75054 1194 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 CCDC171Q6TFL3 1326 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 FAM205AQ6ZU69 1335 aa24.61■■□□□ 1.53
VCPKMT-203ENST00000484763 TBC1D22AQ8WUA7 517 aa24.6■■□□□ 1.53
VCPKMT-203ENST00000484763 OSBP2Q969R2 916 aa24.6■■□□□ 1.53
VCPKMT-203ENST00000484763 LSG1Q9H089 658 aaKnown RBP24.6■■□□□ 1.53
VCPKMT-203ENST00000484763 DBNDD1Q9H9R9 158 aa24.6■■□□□ 1.53
VCPKMT-203ENST00000484763 VPS33BQ9H267 617 aa24.59■■□□□ 1.53
VCPKMT-203ENST00000484763 M0R2C6 588 aa24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 ECE2O60344 883 aa24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 RBM25P49756 843 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 TMED8Q6PL24 325 aaPredicted RBP24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 PRDX5P30044 214 aa24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 GTF2IP78347 998 aa24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 CCDC129Q6ZRS4 1044 aa24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 PUS7LQ9H0K6 701 aaKnown RBP24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 TAOK3Q9H2K8 898 aa24.58■■□□□ 1.53
VCPKMT-203ENST00000484763 SCN9AQ15858 1988 aa24.57■■□□□ 1.52
VCPKMT-203ENST00000484763 LDHBP07195 334 aaKnown RBP24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 MFSD14BQ5SR56 506 aa24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 NSUN4Q96CB9 384 aaKnown RBP24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 ZNF277Q9NRM2 450 aaPredicted RBP24.56■■□□□ 1.52
VCPKMT-203ENST00000484763 ZNF646O15015 1829 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms