RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
CCDC66-219ENST00000484441 SOX17Q9H6I2 414 aaPredicted RBP9.23□□□□□ -0.93
CCDC66-219ENST00000484441 METTL12A8MUP2 240 aa9.22□□□□□ -0.93
CCDC66-219ENST00000484441 ADAM23O75077 832 aa9.22□□□□□ -0.93
CCDC66-219ENST00000484441 WISP1O95388 367 aa9.22□□□□□ -0.93
CCDC66-219ENST00000484441 CDC25BP30305 580 aa9.22□□□□□ -0.93
CCDC66-219ENST00000484441 GRIA4P48058 902 aa9.22□□□□□ -0.93
CCDC66-219ENST00000484441 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
CCDC66-219ENST00000484441 A0A096LPE4 126 aa9.21□□□□□ -0.94
CCDC66-219ENST00000484441 A0A1W2PPZ6 126 aa9.21□□□□□ -0.94
CCDC66-219ENST00000484441 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.94
CCDC66-219ENST00000484441 FURINP09958 794 aa9.21□□□□□ -0.94
CCDC66-219ENST00000484441 ITPKAP23677 461 aa9.21□□□□□ -0.94
CCDC66-219ENST00000484441 IREB2P48200 963 aaKnown RBP9.21□□□□□ -0.94
CCDC66-219ENST00000484441 SUZ12Q15022 739 aaKnown RBP9.21□□□□□ -0.94
CCDC66-219ENST00000484441 ENOX2Q16206 610 aaKnown RBP9.21□□□□□ -0.94
CCDC66-219ENST00000484441 SND1Q7KZF4 910 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC66-219ENST00000484441 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.94
CCDC66-219ENST00000484441 ASAP3Q8TDY4 903 aa9.21□□□□□ -0.94
CCDC66-219ENST00000484441 AKTIPQ9H8T0 292 aa9.21□□□□□ -0.94
CCDC66-219ENST00000484441 ESRRAP11474 423 aaPredicted RBP9.2□□□□□ -0.94
CCDC66-219ENST00000484441 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
CCDC66-219ENST00000484441 IKBKEQ14164 716 aa9.2□□□□□ -0.94
CCDC66-219ENST00000484441 ZSCAN29Q8IWY8 852 aaPredicted RBP9.2□□□□□ -0.94
CCDC66-219ENST00000484441 MEGF10Q96KG7 1140 aa9.2□□□□□ -0.94
CCDC66-219ENST00000484441 ABCB6Q9NP58 842 aa9.2□□□□□ -0.94
CCDC66-219ENST00000484441 K7ELQ4 463 aaPredicted RBP9.19□□□□□ -0.94
CCDC66-219ENST00000484441 PLCB3Q01970 1234 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 C19orf57Q0VDD7 668 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 HGSNATQ68CP4 663 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 GLIS3Q8NEA6 775 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 EHD4Q9H223 541 aa9.19□□□□□ -0.94
CCDC66-219ENST00000484441 CLEC4MQ9H2X3 399 aaPredicted RBP9.19□□□□□ -0.94
CCDC66-219ENST00000484441 DDX3YO15523 660 aaKnown RBP9.18□□□□□ -0.94
CCDC66-219ENST00000484441 H2AFB1P0C5Y9 115 aa9.18□□□□□ -0.94
CCDC66-219ENST00000484441 H2AFB2P0C5Z0 115 aa9.18□□□□□ -0.94
CCDC66-219ENST00000484441 EPS8L3Q8TE67 593 aaKnown RBP9.18□□□□□ -0.94
CCDC66-219ENST00000484441 NRSN2Q9GZP1 204 aa9.18□□□□□ -0.94
CCDC66-219ENST00000484441 PNMA6FA0A0J9YX94 578 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 ALX3O95076 343 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 ITGB7P26010 798 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 ARL4DP49703 201 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 GRM2Q14416 872 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 ACAD11Q709F0 780 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
CCDC66-219ENST00000484441 SLC7A3Q8WY07 619 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 TRAK1Q9UPV9 953 aa9.17□□□□□ -0.94
CCDC66-219ENST00000484441 DYRK3O43781 588 aa9.16□□□□□ -0.94
CCDC66-219ENST00000484441 PCDH1Q08174 1060 aa9.16□□□□□ -0.94
CCDC66-219ENST00000484441 DUOXA2Q1HG44 320 aa9.16□□□□□ -0.94
CCDC66-219ENST00000484441 ZNF423Q2M1K9 1284 aa9.16□□□□□ -0.94
CCDC66-219ENST00000484441 FBF1Q8TES7 1133 aa9.16□□□□□ -0.94
CCDC66-219ENST00000484441 UBASH3BQ8TF42 649 aa9.16□□□□□ -0.94
CCDC66-219ENST00000484441 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.94
CCDC66-219ENST00000484441 B3GALT4O96024 378 aa9.15□□□□□ -0.94
CCDC66-219ENST00000484441 PI16Q6UXB8 463 aa9.15□□□□□ -0.94
CCDC66-219ENST00000484441 TP53INP1Q96A56 240 aa9.15□□□□□ -0.94
CCDC66-219ENST00000484441 TMEM238LA0A1B0GVL6 79 aa9.14□□□□□ -0.95
CCDC66-219ENST00000484441 GADD45BO75293 160 aaPredicted RBP9.14□□□□□ -0.95
CCDC66-219ENST00000484441 NLRP12P59046 1061 aa9.14□□□□□ -0.95
CCDC66-219ENST00000484441 RPS26P11Q5JNZ5 115 aaPredicted RBP9.14□□□□□ -0.95
CCDC66-219ENST00000484441 LOC100289279A0A1B0GTE1 492 aa9.13□□□□□ -0.95
CCDC66-219ENST00000484441 MEGF11A6BM72 1044 aa9.13□□□□□ -0.95
CCDC66-219ENST00000484441 UBL7Q96S82 380 aaPredicted RBP9.13□□□□□ -0.95
CCDC66-219ENST00000484441 NLRP2Q9NX02 1062 aa9.13□□□□□ -0.95
CCDC66-219ENST00000484441 COL19A1Q14993 1142 aa9.12□□□□□ -0.95
CCDC66-219ENST00000484441 UVSSAQ2YD98 709 aa9.12□□□□□ -0.95
CCDC66-219ENST00000484441 CEP41Q9BYV8 373 aa9.12□□□□□ -0.95
CCDC66-219ENST00000484441 RNF208Q9H0X6 261 aa9.12□□□□□ -0.95
CCDC66-219ENST00000484441 P4HBP07237 508 aaKnown RBP9.11□□□□□ -0.95
CCDC66-219ENST00000484441 GLB1P16278 677 aa9.11□□□□□ -0.95
CCDC66-219ENST00000484441 MAPK8P45983 427 aa9.11□□□□□ -0.95
CCDC66-219ENST00000484441 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC66-219ENST00000484441 FAM46AQ96IP4 442 aaKnown RBP9.11□□□□□ -0.95
CCDC66-219ENST00000484441 TMPRSS13Q9BYE2 586 aa9.11□□□□□ -0.95
CCDC66-219ENST00000484441 BCO2Q9BYV7 579 aa9.11□□□□□ -0.95
CCDC66-219ENST00000484441 XRCC5P13010 732 aaKnown RBP9.1□□□□□ -0.95
CCDC66-219ENST00000484441 GSTM4Q03013 218 aa9.1□□□□□ -0.95
CCDC66-219ENST00000484441 ANKRD34AQ69YU3 496 aa9.1□□□□□ -0.95
CCDC66-219ENST00000484441 ALG1LQ6GMV1 187 aa9.1□□□□□ -0.95
CCDC66-219ENST00000484441 DNAJC14Q6Y2X3 702 aaPredicted RBP9.1□□□□□ -0.95
CCDC66-219ENST00000484441 SETDB2Q96T68 719 aa9.1□□□□□ -0.95
CCDC66-219ENST00000484441 TRIM56Q9BRZ2 755 aaKnown RBP9.1□□□□□ -0.95
CCDC66-219ENST00000484441 SEMA6BQ9H3T3 888 aa9.1□□□□□ -0.95
CCDC66-219ENST00000484441 SUGCTQ9HAC7 445 aa9.1□□□□□ -0.95
CCDC66-219ENST00000484441 DLGAP3O95886 979 aa9.09□□□□□ -0.95
CCDC66-219ENST00000484441 FAAP100Q0VG06 881 aa9.09□□□□□ -0.95
CCDC66-219ENST00000484441 PRR23CQ6ZRP0 262 aa9.09□□□□□ -0.95
CCDC66-219ENST00000484441 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
CCDC66-219ENST00000484441 RUSC1Q9BVN2 902 aa9.09□□□□□ -0.95
CCDC66-219ENST00000484441 SRCIN1Q9C0H9 1055 aa9.09□□□□□ -0.95
CCDC66-219ENST00000484441 C3orf58Q8NDZ4 430 aa9.08□□□□□ -0.96
CCDC66-219ENST00000484441 USP26Q9BXU7 913 aa9.08□□□□□ -0.96
CCDC66-219ENST00000484441 ZFYVE1Q9HBF4 777 aa9.08□□□□□ -0.96
CCDC66-219ENST00000484441 WWC3Q9ULE0 1092 aa9.08□□□□□ -0.96
CCDC66-219ENST00000484441 TIAF1O95411 115 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms