RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 TIMM10P62072 90 aa15.23■□□□□ 0.03
SHANK1-208ENST00000483981 CAVIN4Q5BKX8 364 aa15.23■□□□□ 0.03
SHANK1-208ENST00000483981 RPAP2Q8IXW5 612 aaPredicted RBP15.23■□□□□ 0.03
SHANK1-208ENST00000483981 JAG2Q9Y219 1238 aa15.23■□□□□ 0.03
SHANK1-208ENST00000483981 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
SHANK1-208ENST00000483981 A0A1B0GUL7 405 aa15.22■□□□□ 0.03
SHANK1-208ENST00000483981 SURF6O75683 361 aaKnown RBP15.22■□□□□ 0.03
SHANK1-208ENST00000483981 ADORA1P30542 326 aa15.22■□□□□ 0.03
SHANK1-208ENST00000483981 MMP14P50281 582 aa15.22■□□□□ 0.03
SHANK1-208ENST00000483981 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHANK1-208ENST00000483981 KIF4BQ2VIQ3 1234 aa15.22■□□□□ 0.03
SHANK1-208ENST00000483981 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
SHANK1-208ENST00000483981 ZBED3Q96IU2 234 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-208ENST00000483981 CHMP4BQ9H444 224 aaKnown RBP15.22■□□□□ 0.03
SHANK1-208ENST00000483981 MYOZ2Q9NPC6 264 aa15.22■□□□□ 0.03
SHANK1-208ENST00000483981 IQSEC3Q9UPP2 1182 aaPredicted RBP15.22■□□□□ 0.03
SHANK1-208ENST00000483981 COL1A1P02452 1464 aaPredicted RBP15.21■□□□□ 0.03
SHANK1-208ENST00000483981 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
SHANK1-208ENST00000483981 GRIK5Q16478 980 aa15.21■□□□□ 0.03
SHANK1-208ENST00000483981 RBM26Q5T8P6 1007 aaKnown RBP15.21■□□□□ 0.03
SHANK1-208ENST00000483981 KIAA0825Q8IV33 1275 aa15.21■□□□□ 0.03
SHANK1-208ENST00000483981 GPR108Q9NPR9 543 aa15.21■□□□□ 0.03
SHANK1-208ENST00000483981 PHKA1P46020 1223 aa15.2■□□□□ 0.02
SHANK1-208ENST00000483981 APLP1P51693 650 aa15.2■□□□□ 0.02
SHANK1-208ENST00000483981 FMR1Q06787 632 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHANK1-208ENST00000483981 CCDC102BQ68D86 513 aa15.2■□□□□ 0.02
SHANK1-208ENST00000483981 VPS37DQ86XT2 251 aa15.2■□□□□ 0.02
SHANK1-208ENST00000483981 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
SHANK1-208ENST00000483981 AKAP2Q9Y2D5 859 aa15.2■□□□□ 0.02
SHANK1-208ENST00000483981 POLR2AP24928 1970 aaKnown RBP15.19■□□□□ 0.02
SHANK1-208ENST00000483981 SCARF1Q14162 830 aa15.19■□□□□ 0.02
SHANK1-208ENST00000483981 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
SHANK1-208ENST00000483981 MFSD14BQ5SR56 506 aa15.19■□□□□ 0.02
SHANK1-208ENST00000483981 DNAJC5GQ8N7S2 189 aa15.19■□□□□ 0.02
SHANK1-208ENST00000483981 MTMR14Q8NCE2 650 aa15.19■□□□□ 0.02
SHANK1-208ENST00000483981 TRAF5O00463 557 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 WNT10BO00744 389 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 HTRA3P83110 453 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 TNNI3KQ59H18 835 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 OGFOD1Q8N543 542 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 GLIS2Q9BZE0 524 aaPredicted RBP15.18■□□□□ 0.02
SHANK1-208ENST00000483981 PCDHAC2Q9Y5I4 1007 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 FPGT-TNNI3KV9GXZ4 949 aa15.18■□□□□ 0.02
SHANK1-208ENST00000483981 SEMA3EO15041 775 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 CST9Q5W186 159 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 DLK2Q6UY11 383 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 TBC1D22AQ8WUA7 517 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 EXOC6BQ9Y2D4 811 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 AOX1Q06278 1338 aa15.17■□□□□ 0.02
SHANK1-208ENST00000483981 MYH13Q9UKX3 1938 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
SHANK1-208ENST00000483981 CHAF1AQ13111 956 aaPredicted RBP15.16■□□□□ 0.02
SHANK1-208ENST00000483981 RASGRF1Q13972 1273 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 USP48Q86UV5 1035 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
SHANK1-208ENST00000483981 PRMT6Q96LA8 375 aaPredicted RBP15.16■□□□□ 0.02
SHANK1-208ENST00000483981 NEUROD6Q96NK8 337 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 CRBNQ96SW2 442 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 GGA3Q9NZ52 723 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 TTF2Q9UNY4 1162 aaKnown RBP15.16■□□□□ 0.02
SHANK1-208ENST00000483981 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 PCDHB15Q9Y5E8 787 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 PDS5AQ29RF7 1337 aaKnown RBP15.16■□□□□ 0.02
SHANK1-208ENST00000483981 PITPNM2Q9BZ72 1349 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
SHANK1-208ENST00000483981 HMMRO75330 724 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 FRAT2O75474 233 aaPredicted RBP15.15■□□□□ 0.02
SHANK1-208ENST00000483981 ARID4AP29374 1257 aaPredicted RBP15.15■□□□□ 0.02
SHANK1-208ENST00000483981 OS9Q13438 667 aaPredicted RBP15.15■□□□□ 0.02
SHANK1-208ENST00000483981 ANGEL2Q5VTE6 544 aaKnown RBP15.15■□□□□ 0.02
SHANK1-208ENST00000483981 WDR66Q8TBY9 1149 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 DBNDD2Q9BQY9 259 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 MRIQ9BWK5 157 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
SHANK1-208ENST00000483981 SERPINA10Q9UK55 444 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
SHANK1-208ENST00000483981 TRPM7Q96QT4 1865 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 ADM5C9JUS6 153 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 HDLBPQ00341 1268 aaKnown RBP15.14■□□□□ 0.01
SHANK1-208ENST00000483981 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 KRT26Q7Z3Y9 468 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 ERC1Q8IUD2 1116 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 RHPN1Q8TCX5 695 aa15.14■□□□□ 0.01
SHANK1-208ENST00000483981 DCPSQ96C86 337 aaKnown RBP15.14■□□□□ 0.01
SHANK1-208ENST00000483981 TLR7Q9NYK1 1049 aaKnown RBP15.14■□□□□ 0.01
SHANK1-208ENST00000483981 DBNLQ9UJU6 430 aaKnown RBP15.14■□□□□ 0.01
SHANK1-208ENST00000483981 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
SHANK1-208ENST00000483981 DLGAP5Q15398 846 aa15.13■□□□□ 0.01
SHANK1-208ENST00000483981 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
SHANK1-208ENST00000483981 HMG20BQ9P0W2 317 aa15.13■□□□□ 0.01
SHANK1-208ENST00000483981 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
SHANK1-208ENST00000483981 AKAP11Q9UKA4 1901 aa15.12■□□□□ 0.01
SHANK1-208ENST00000483981 RAB11FIP3O75154 756 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms