RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
SMAD9-204ENST00000483941 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
SMAD9-204ENST00000483941 BACH2Q9BYV9 841 aa16.97■□□□□ 0.31
SMAD9-204ENST00000483941 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
SMAD9-204ENST00000483941 ANKIB1Q9P2G1 1089 aa16.97■□□□□ 0.31
SMAD9-204ENST00000483941 ABT1Q9ULW3 272 aaKnown RBP16.97■□□□□ 0.31
SMAD9-204ENST00000483941 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
SMAD9-204ENST00000483941 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
SMAD9-204ENST00000483941 GSPT1P15170 499 aaKnown RBP16.96■□□□□ 0.31
SMAD9-204ENST00000483941 SDSP20132 328 aa16.96■□□□□ 0.31
SMAD9-204ENST00000483941 ATP2B4P23634 1241 aa16.96■□□□□ 0.31
SMAD9-204ENST00000483941 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
SMAD9-204ENST00000483941 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
SMAD9-204ENST00000483941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
SMAD9-204ENST00000483941 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
SMAD9-204ENST00000483941 TAF5LO75529 589 aa16.95■□□□□ 0.3
SMAD9-204ENST00000483941 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
SMAD9-204ENST00000483941 HELBQ8NG08 1087 aaPredicted RBP16.95■□□□□ 0.3
SMAD9-204ENST00000483941 HAUS7Q99871 368 aa16.95■□□□□ 0.3
SMAD9-204ENST00000483941 TLR7Q9NYK1 1049 aaKnown RBP16.95■□□□□ 0.3
SMAD9-204ENST00000483941 PODXL2Q9NZ53 605 aa16.95■□□□□ 0.3
SMAD9-204ENST00000483941 ZBTB22O15209 634 aa16.94■□□□□ 0.3
SMAD9-204ENST00000483941 TTF1Q15361 905 aaPredicted RBP16.94■□□□□ 0.3
SMAD9-204ENST00000483941 TSHZ3Q63HK5 1081 aa16.94■□□□□ 0.3
SMAD9-204ENST00000483941 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
SMAD9-204ENST00000483941 BOLA2Q9H3K6 86 aa16.94■□□□□ 0.3
SMAD9-204ENST00000483941 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
SMAD9-204ENST00000483941 FZD9O00144 591 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 SEMA3EO15041 775 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
SMAD9-204ENST00000483941 MLLT1Q03111 559 aaPredicted RBP16.93■□□□□ 0.3
SMAD9-204ENST00000483941 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 GPC2Q8N158 579 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 RUFY2Q8WXA3 655 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 GGA1Q9UJY5 639 aa16.93■□□□□ 0.3
SMAD9-204ENST00000483941 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
SMAD9-204ENST00000483941 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
SMAD9-204ENST00000483941 IGSF3O75054 1194 aa16.92■□□□□ 0.3
SMAD9-204ENST00000483941 ARID4AP29374 1257 aaPredicted RBP16.92■□□□□ 0.3
SMAD9-204ENST00000483941 C15orf52Q6ZUT6 534 aaKnown RBP16.92■□□□□ 0.3
SMAD9-204ENST00000483941 BEGAINQ9BUH8 593 aa16.92■□□□□ 0.3
SMAD9-204ENST00000483941 COL4A5P29400 1685 aa16.91■□□□□ 0.3
SMAD9-204ENST00000483941 SNED1Q8TER0 1413 aa16.91■□□□□ 0.3
SMAD9-204ENST00000483941 ADORA1P30542 326 aa16.91■□□□□ 0.3
SMAD9-204ENST00000483941 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
SMAD9-204ENST00000483941 CAPNS2Q96L46 248 aa16.91■□□□□ 0.3
SMAD9-204ENST00000483941 RFX7Q2KHR2 1363 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 HIBADHP31937 336 aaKnown RBP16.9■□□□□ 0.3
SMAD9-204ENST00000483941 ECE1P42892 770 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 ZSCAN25Q6NSZ9 544 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 ZNF804AQ7Z570 1209 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 MPNDQ8N594 471 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 EYA3Q99504 573 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
SMAD9-204ENST00000483941 FSD1Q9BTV5 496 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 PAG1Q9NWQ8 432 aa16.9■□□□□ 0.3
SMAD9-204ENST00000483941 REC8O95072 547 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
SMAD9-204ENST00000483941 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
SMAD9-204ENST00000483941 RGS19P49795 217 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 GPSM2P81274 684 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 GRM1Q13255 1194 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
SMAD9-204ENST00000483941 SUPT20HQ8NEM7 779 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 JDP2Q8WYK2 163 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMAD9-204ENST00000483941 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 DENND2AQ9ULE3 1009 aa16.89■□□□□ 0.29
SMAD9-204ENST00000483941 FRAT2O75474 233 aaPredicted RBP16.88■□□□□ 0.29
SMAD9-204ENST00000483941 UFL1O94874 794 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 CYP4F22Q6NT55 531 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
SMAD9-204ENST00000483941 FBXO33Q7Z6M2 555 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 PSMD1Q99460 953 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 PCDH10Q9P2E7 1040 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 GJA3Q9Y6H8 435 aa16.88■□□□□ 0.29
SMAD9-204ENST00000483941 PDS5AQ29RF7 1337 aaKnown RBP16.88■□□□□ 0.29
SMAD9-204ENST00000483941 C6orf229H3BNL8 230 aa16.87■□□□□ 0.29
SMAD9-204ENST00000483941 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
SMAD9-204ENST00000483941 MAP4K4O95819 1239 aaPredicted RBP16.87■□□□□ 0.29
SMAD9-204ENST00000483941 CHMLP26374 656 aa16.87■□□□□ 0.29
SMAD9-204ENST00000483941 PHKA1P46020 1223 aa16.87■□□□□ 0.29
SMAD9-204ENST00000483941 BCAMP50895 628 aa16.87■□□□□ 0.29
SMAD9-204ENST00000483941 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
SMAD9-204ENST00000483941 SPATA5Q8NB90 893 aa16.87■□□□□ 0.29
SMAD9-204ENST00000483941 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
SMAD9-204ENST00000483941 FAM84BQ96KN1 310 aaPredicted RBP16.87■□□□□ 0.29
SMAD9-204ENST00000483941 GPR101Q96P66 508 aaPredicted RBP16.87■□□□□ 0.29
SMAD9-204ENST00000483941 CASP8AP2Q9UKL3 1982 aa16.86■□□□□ 0.29
SMAD9-204ENST00000483941 GOLIM4O00461 696 aa16.86■□□□□ 0.29
SMAD9-204ENST00000483941 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMAD9-204ENST00000483941 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
SMAD9-204ENST00000483941 ZC3H12CQ9C0D7 883 aaKnown RBP16.86■□□□□ 0.29
SMAD9-204ENST00000483941 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
SMAD9-204ENST00000483941 MCAMP43121 646 aa16.85■□□□□ 0.29
SMAD9-204ENST00000483941 GYG1P46976 350 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms