RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 EFCAB2Q5VUJ9 269 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 TXNDC11Q6PKC3 985 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 OR13H1Q8NG92 308 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 KCNK4Q9NYG8 393 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 SIGLEC1Q9BZZ2 1709 aa5.98□□□□□ -1.45
LRCH3-217ENST00000483442 MAGI2Q86UL8 1455 aa5.97□□□□□ -1.45
LRCH3-217ENST00000483442 WISP1O95388 367 aa5.97□□□□□ -1.45
LRCH3-217ENST00000483442 ARID4AP29374 1257 aaPredicted RBP5.97□□□□□ -1.45
LRCH3-217ENST00000483442 TMEM130Q8N3G9 435 aa5.97□□□□□ -1.45
LRCH3-217ENST00000483442 COL26A1Q96A83 441 aa5.97□□□□□ -1.45
LRCH3-217ENST00000483442 TRAPPC8Q9Y2L5 1435 aa5.97□□□□□ -1.45
LRCH3-217ENST00000483442 TTC37Q6PGP7 1564 aa5.97□□□□□ -1.45
LRCH3-217ENST00000483442 SETD1BQ9UPS6 1966 aaKnown RBP5.97□□□□□ -1.45
LRCH3-217ENST00000483442 IQSEC2Q5JU85 1478 aa5.96□□□□□ -1.45
LRCH3-217ENST00000483442 FER1L4A9Z1Z3 1794 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 EFCAB5A4FU69 1503 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 ARHGEF12Q9NZN5 1544 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 PREX1Q8TCU6 1659 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 LINC01387J3KSC0 135 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 SCNN1AP37088 669 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 ZAP70P43403 619 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 NBPF11Q86T75 865 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 GPR152Q8TDT2 470 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 UBL7Q96S82 380 aaPredicted RBP5.96□□□□□ -1.46
LRCH3-217ENST00000483442 LACRTQ9GZZ8 138 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
LRCH3-217ENST00000483442 SEPT3Q9UH03 358 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 RNF112Q9ULX5 631 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 C9orf84Q5VXU9 1444 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 HECW1Q76N89 1606 aa5.96□□□□□ -1.46
LRCH3-217ENST00000483442 ATG7O95352 703 aa5.95□□□□□ -1.46
LRCH3-217ENST00000483442 CDC25BP30305 580 aa5.95□□□□□ -1.46
LRCH3-217ENST00000483442 RICTORQ6R327 1708 aa5.95□□□□□ -1.46
LRCH3-217ENST00000483442 Q6ZS46 218 aa5.95□□□□□ -1.46
LRCH3-217ENST00000483442 ATCAYQ86WG3 371 aa5.95□□□□□ -1.46
LRCH3-217ENST00000483442 RASSF4Q9H2L5 321 aa5.95□□□□□ -1.46
LRCH3-217ENST00000483442 NCOA1Q15788 1441 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 FSTP19883 344 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 CEP135Q66GS9 1140 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.94□□□□□ -1.46
LRCH3-217ENST00000483442 PIK3R5Q8WYR1 880 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 KRTAP4-12Q9BQ66 201 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 CARD10Q9BWT7 1032 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 TMEM63CQ9P1W3 806 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 RGS17Q9UGC6 210 aaPredicted RBP5.94□□□□□ -1.46
LRCH3-217ENST00000483442 PPME1Q9Y570 386 aa5.94□□□□□ -1.46
LRCH3-217ENST00000483442 MED1Q15648 1581 aaPredicted RBP5.93□□□□□ -1.46
LRCH3-217ENST00000483442 PLCH2O75038 1416 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 DDX3YO15523 660 aaKnown RBP5.93□□□□□ -1.46
LRCH3-217ENST00000483442 KIF4AO95239 1232 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 MED26O95402 600 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 ACPPP15309 386 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 ARMC10Q8N2F6 343 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 CLP1Q92989 425 aaKnown RBP5.93□□□□□ -1.46
LRCH3-217ENST00000483442 RBSNQ9H1K0 784 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 SH2B1Q9NRF2 756 aaPredicted RBP5.93□□□□□ -1.46
LRCH3-217ENST00000483442 CNTN3Q9P232 1028 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 STIM2Q9P246 746 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 NUP153P49790 1475 aaKnown RBP5.93□□□□□ -1.46
LRCH3-217ENST00000483442 ZMYM4Q5VZL5 1548 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.93□□□□□ -1.46
LRCH3-217ENST00000483442 ZMYM3Q14202 1370 aa5.93□□□□□ -1.46
LRCH3-217ENST00000483442 ADAM11O75078 769 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 GLB1P16278 677 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 EPHA1P21709 976 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 SSTR4P31391 388 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 HYAL2Q12891 473 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 CEP120Q8N960 986 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 CAMSAP1Q5T5Y3 1602 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 RAPGEF6Q8TEU7 1601 aa5.92□□□□□ -1.46
LRCH3-217ENST00000483442 CTTNBP2Q8WZ74 1663 aa5.91□□□□□ -1.46
LRCH3-217ENST00000483442 A6NHS1 94 aa5.91□□□□□ -1.46
LRCH3-217ENST00000483442 PTCD1O75127 700 aaKnown RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 TRPA1O75762 1119 aa5.91□□□□□ -1.46
LRCH3-217ENST00000483442 TTC39BQ5VTQ0 682 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 KIAA1211Q6ZU35 1233 aa5.91□□□□□ -1.46
LRCH3-217ENST00000483442 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
LRCH3-217ENST00000483442 FOXD4L4Q8WXT5 416 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 NUDT16Q96DE0 195 aaKnown RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 POP1Q99575 1024 aaKnown RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 SRA1Q9HD15 236 aaKnown RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 ABI2Q9NYB9 513 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-217ENST00000483442 KANSL3Q9P2N6 904 aa5.91□□□□□ -1.46
LRCH3-217ENST00000483442 PRXQ9BXM0 1461 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 FSCN2O14926 492 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 CDC27P30260 824 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 CD68P34810 354 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-217ENST00000483442 GGT6Q6P531 493 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 ACAD11Q709F0 780 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 UBASH3BQ8TF42 649 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 KLHDC7BQ96G42 594 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 PBX4Q9BYU1 374 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 GGNBP2Q9H3C7 697 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
LRCH3-217ENST00000483442 CFAP74Q9C0B2 1584 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 NFKBIEO00221 500 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 SMNDC1O75940 238 aaKnown RBP eCLIP5.89□□□□□ -1.47
LRCH3-217ENST00000483442 ATP2B4P23634 1241 aa5.89□□□□□ -1.47
LRCH3-217ENST00000483442 HGSNATQ68CP4 663 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms