RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 ARID3AQ99856 593 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 GGA1Q9UJY5 639 aa11.71□□□□□ -0.53
LIMK1-205ENST00000483414 CCDC93Q567U6 631 aa11.71□□□□□ -0.54
LIMK1-205ENST00000483414 ZNF384Q8TF68 577 aa11.71□□□□□ -0.54
LIMK1-205ENST00000483414 SALL1Q9NSC2 1324 aa11.71□□□□□ -0.54
LIMK1-205ENST00000483414 LAMB1P07942 1786 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 RFX7Q2KHR2 1363 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 YDJCA8MPS7 323 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 UFL1O94874 794 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 SLC5A1P13866 664 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-205ENST00000483414 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 PI16Q6UXB8 463 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
LIMK1-205ENST00000483414 SOGA3Q5TF21 947 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-205ENST00000483414 HMG20BQ9P0W2 317 aa11.7□□□□□ -0.54
LIMK1-205ENST00000483414 SIPA1L1O43166 1804 aa11.69□□□□□ -0.54
LIMK1-205ENST00000483414 ANKIB1Q9P2G1 1089 aa11.69□□□□□ -0.54
LIMK1-205ENST00000483414 WDR90Q96KV7 1748 aa11.69□□□□□ -0.54
LIMK1-205ENST00000483414 FAM205AQ6ZU69 1335 aa11.69□□□□□ -0.54
LIMK1-205ENST00000483414 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
LIMK1-205ENST00000483414 CD209Q9NNX6 404 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 IFIT2P09913 472 aaKnown RBP11.68□□□□□ -0.54
LIMK1-205ENST00000483414 SEMA3EO15041 775 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 IFIT1P09914 478 aaKnown RBP11.68□□□□□ -0.54
LIMK1-205ENST00000483414 ANTXR1Q9H6X2 564 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 PAPPA2Q9BXP8 1791 aa11.68□□□□□ -0.54
LIMK1-205ENST00000483414 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 RASSF7Q02833 373 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 FAM43AQ8N2R8 423 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
LIMK1-205ENST00000483414 NAV1Q8NEY1 1877 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 GLRX3O76003 335 aaKnown RBP11.67□□□□□ -0.54
LIMK1-205ENST00000483414 SDSP20132 328 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 AOC3Q16853 763 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 COA1Q9GZY4 146 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 IL25Q9H293 177 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 CHGBP05060 677 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 HIBADHP31937 336 aaKnown RBP11.67□□□□□ -0.54
LIMK1-205ENST00000483414 GRIK5Q16478 980 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
LIMK1-205ENST00000483414 PIH1D3Q9NQM4 214 aaKnown RBP11.67□□□□□ -0.54
LIMK1-205ENST00000483414 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 TICAM2Q86XR7 235 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 CERS5Q8N5B7 392 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 NEUROD6Q96NK8 337 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 FZD9O00144 591 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 ZAP70P43403 619 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 ZNF277Q9NRM2 450 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-205ENST00000483414 PPP1R1BQ9UD71 204 aaPredicted RBP11.66□□□□□ -0.54
LIMK1-205ENST00000483414 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 SCN4AP35499 1836 aa11.66□□□□□ -0.54
LIMK1-205ENST00000483414 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
LIMK1-205ENST00000483414 FKBP1AP62942 108 aaKnown RBP11.65□□□□□ -0.54
LIMK1-205ENST00000483414 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 TAOK3Q9H2K8 898 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
LIMK1-205ENST00000483414 ECE2O60344 883 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 DACT2Q5SW24 774 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 SUPT20HQ8NEM7 779 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 GMLQ99445 158 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 BOLA2Q9H3K6 86 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
LIMK1-205ENST00000483414 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 FOXP2O15409 715 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 CCDC158Q5M9N0 1113 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 ZNF804AQ7Z570 1209 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 PAG1Q9NWQ8 432 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 CHMP5Q9NZZ3 219 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 TTC39AQ5SRH9 613 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 PODNQ7Z5L7 613 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 ADGRA1Q86SQ6 560 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 EYA3Q99504 573 aa11.64□□□□□ -0.55
LIMK1-205ENST00000483414 ERC2O15083 957 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 CAVIN4Q5BKX8 364 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 KBTBD3Q8NAB2 608 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 DENND2AQ9ULE3 1009 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 C6orf229H3BNL8 230 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
LIMK1-205ENST00000483414 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 DBNDD1Q9H9R9 158 aa11.63□□□□□ -0.55
LIMK1-205ENST00000483414 BAZ2AQ9UIF9 1905 aaKnown RBP11.63□□□□□ -0.55
LIMK1-205ENST00000483414 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 MCM4P33991 863 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 DOK7Q18PE1 504 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 SLFNL1Q499Z3 407 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 EVI5LQ96CN4 794 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 MAP4K4O95819 1239 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-205ENST00000483414 VIL1P09327 827 aaKnown RBP11.62□□□□□ -0.55
LIMK1-205ENST00000483414 KCNJ4P48050 445 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 L1TD1Q5T7N2 865 aaKnown RBP11.62□□□□□ -0.55
LIMK1-205ENST00000483414 TRAK2O60296 914 aa11.62□□□□□ -0.55
LIMK1-205ENST00000483414 IGSF3O75054 1194 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms