RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 DCTN1Q14203 1278 aa7.75□□□□□ -1.17
CSDE1-207ENST00000483407 EAPPQ56P03 285 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-207ENST00000483407 NBPF10Q6P3W6 841 aaKnown RBP7.75□□□□□ -1.17
CSDE1-207ENST00000483407 NBPF15Q8N660 670 aa7.75□□□□□ -1.17
CSDE1-207ENST00000483407 PNMA1Q8ND90 353 aa7.75□□□□□ -1.17
CSDE1-207ENST00000483407 ZNF277Q9NRM2 450 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-207ENST00000483407 HACL1Q9UJ83 578 aa7.75□□□□□ -1.17
CSDE1-207ENST00000483407 TIAM2Q8IVF5 1701 aa7.75□□□□□ -1.17
CSDE1-207ENST00000483407 TMEM88BA6NKF7 163 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 ERVV-1B6SEH8 477 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 F12P00748 615 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-207ENST00000483407 IARSP41252 1262 aaKnown RBP7.74□□□□□ -1.17
CSDE1-207ENST00000483407 CC2D2BQ6DHV5 1058 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 KIF6Q6ZMV9 814 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 PNMA8AQ86V59 439 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-207ENST00000483407 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 AIDAQ96BJ3 306 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 PPP1R12CQ9BZL4 782 aa7.74□□□□□ -1.17
CSDE1-207ENST00000483407 CNTNAP1P78357 1384 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 ANKRD31Q8N7Z5 1873 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 COL11A2P13942 1736 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-207ENST00000483407 EPHX2P34913 555 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 EIF6P56537 245 aaKnown RBP7.73□□□□□ -1.17
CSDE1-207ENST00000483407 HLFQ16534 295 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 PTPRNQ16849 979 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 GPC2Q8N158 579 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 SYNE4Q8N205 404 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 NGEFQ8N5V2 710 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 RPGRQ92834 1020 aaKnown RBP7.73□□□□□ -1.17
CSDE1-207ENST00000483407 PSMD1Q99460 953 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 TMX4Q9H1E5 349 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-207ENST00000483407 PNNQ9H307 717 aaKnown RBP7.73□□□□□ -1.17
CSDE1-207ENST00000483407 MIS18AQ9NYP9 233 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 MAP3K15Q6ZN16 1313 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 PASKQ96RG2 1323 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 ZNF541Q9H0D2 1346 aa7.73□□□□□ -1.17
CSDE1-207ENST00000483407 SIPA1L3O60292 1781 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-207ENST00000483407 FZD9O00144 591 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 JUNDP17535 347 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 LMOD1P29536 600 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-207ENST00000483407 CRY2Q49AN0 593 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 OLFM4Q6UX06 510 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 PBXIP1Q96AQ6 731 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 WBP1LQ9NX94 342 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 RRP7AQ9Y3A4 280 aaKnown RBP7.72□□□□□ -1.17
CSDE1-207ENST00000483407 VIRMAQ69YN4 1812 aaKnown RBP7.72□□□□□ -1.17
CSDE1-207ENST00000483407 FER1L6Q2WGJ9 1857 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 RNF123Q5XPI4 1314 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 MAPK8IP3Q9UPT6 1336 aa7.72□□□□□ -1.17
CSDE1-207ENST00000483407 SLX4Q8IY92 1834 aa7.71□□□□□ -1.17
CSDE1-207ENST00000483407 FOXN1O15353 648 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 ITGBL1O95965 494 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-207ENST00000483407 MYL6BP14649 208 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 GPTP24298 496 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 CTCFP49711 727 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-207ENST00000483407 VEGFBP49765 207 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 EIF4A1P60842 406 aaKnown RBP7.71□□□□□ -1.18
CSDE1-207ENST00000483407 NR1H3Q13133 447 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 SEMA3FQ13275 785 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 LAPTM4AQ15012 233 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 MSS51Q4VC12 460 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 PPP1R42Q7Z4L9 355 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 CNTROBQ8N137 903 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 LARGE2Q8N3Y3 721 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 RBM17Q96I25 401 aaKnown RBP7.71□□□□□ -1.18
CSDE1-207ENST00000483407 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 PRDM10Q9NQV6 1147 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 FKBPLQ9UIM3 349 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 GJA3Q9Y6H8 435 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 ERBB4Q15303 1308 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 BCORQ6W2J9 1755 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 ABCC12Q96J65 1359 aa7.71□□□□□ -1.18
CSDE1-207ENST00000483407 IBTKQ9P2D0 1353 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-207ENST00000483407 PALM3A6NDB9 673 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-207ENST00000483407 PPEF1O14829 653 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-207ENST00000483407 HOXA10P31260 410 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-207ENST00000483407 PTPN5P54829 565 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 NFE2L2Q16236 605 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 DEFB115Q30KQ5 88 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 PARP10Q53GL7 1025 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 SUSD4Q5VX71 490 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 MAP1SQ66K74 1059 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-207ENST00000483407 TTLL7Q6ZT98 887 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 NIM1KQ8IY84 436 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 CRAMP1Q96RY5 1269 aa7.7□□□□□ -1.18
CSDE1-207ENST00000483407 ABT1Q9ULW3 272 aaKnown RBP7.7□□□□□ -1.18
CSDE1-207ENST00000483407 CCDC88AQ3V6T2 1871 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 RASSF10A6NK89 507 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 ZBBXA8MT70 800 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 DXOO77932 396 aaKnown RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 NTSR2O95665 410 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 MAP2K1Q02750 393 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 ZNF34Q8IZ26 560 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 KCTD17Q8N5Z5 321 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 FAM160A2Q8N612 972 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-207ENST00000483407 PLEKHF1Q96S99 279 aa7.69□□□□□ -1.18
CSDE1-207ENST00000483407 SPSB2Q99619 263 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms